Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A1P30531 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A1P30531 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A1P30531 AC018755.3-202ENST00000596210 929 ntBASIC18.92■□□□□ 0.62
SLC6A1P30531 MIR6765-201ENST00000614092 87 ntBASIC18.92■□□□□ 0.62
SLC6A1P30531 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A1P30531 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A1P30531 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A1P30531 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A1P30531 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A1P30531 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A1P30531 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A1P30531 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
SLC6A1P30531 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SLC6A1P30531 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A1P30531 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A1P30531 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A1P30531 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A1P30531 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A1P30531 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A1P30531 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A1P30531 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
SLC6A1P30531 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SLC6A1P30531 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A1P30531 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A1P30531 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A1P30531 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A1P30531 KRT18P10-201ENST00000388836 1287 ntBASIC18.9■□□□□ 0.62
SLC6A1P30531 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A1P30531 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SLC6A1P30531 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A1P30531 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A1P30531 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A1P30531 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC6A1P30531 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC6A1P30531 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC6A1P30531 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A1P30531 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A1P30531 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A1P30531 DUX4L9-201ENST00000449051 1259 ntBASIC18.89■□□□□ 0.61
SLC6A1P30531 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A1P30531 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A1P30531 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC6A1P30531 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC6A1P30531 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A1P30531 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SLC6A1P30531 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A1P30531 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC6A1P30531 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A1P30531 ALDH1A3-203ENST00000557963 1670 ntBASIC18.89■□□□□ 0.61
SLC6A1P30531 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC6A1P30531 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 AC090877.2-201ENST00000558441 1738 ntBASIC18.88■□□□□ 0.61
SLC6A1P30531 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A1P30531 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A1P30531 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SLC6A1P30531 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A1P30531 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A1P30531 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A1P30531 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A1P30531 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A1P30531 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A1P30531 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SLC6A1P30531 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A1P30531 AL022069.1-201ENST00000568025 1636 ntBASIC18.87■□□□□ 0.61
SLC6A1P30531 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC6A1P30531 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC6A1P30531 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A1P30531 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC6A1P30531 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A1P30531 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A1P30531 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A1P30531 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A1P30531 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SLC6A1P30531 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SLC6A1P30531 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC6A1P30531 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A1P30531 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms