Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD40LGP29965 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CD40LGP29965 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD40LGP29965 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.44■□□□□ 0.7
CD40LGP29965 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD40LGP29965 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD40LGP29965 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.44■□□□□ 0.7
CD40LGP29965 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
CD40LGP29965 AF106564.1-201ENST00000607058 2553 ntBASIC19.44■□□□□ 0.7
CD40LGP29965 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD40LGP29965 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CD40LGP29965 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD40LGP29965 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD40LGP29965 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CD40LGP29965 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.43■□□□□ 0.7
CD40LGP29965 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.43■□□□□ 0.7
CD40LGP29965 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD40LGP29965 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
CD40LGP29965 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.43■□□□□ 0.7
CD40LGP29965 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
CD40LGP29965 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CD40LGP29965 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 AC244015.2-201ENST00000616358 1861 ntBASIC19.42■□□□□ 0.7
CD40LGP29965 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.42■□□□□ 0.7
CD40LGP29965 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CD40LGP29965 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.42■□□□□ 0.7
CD40LGP29965 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
CD40LGP29965 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CD40LGP29965 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CD40LGP29965 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CD40LGP29965 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CD40LGP29965 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.4■□□□□ 0.7
CD40LGP29965 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CD40LGP29965 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CD40LGP29965 AC022413.1-201ENST00000624602 984 ntBASIC19.4■□□□□ 0.7
CD40LGP29965 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CD40LGP29965 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.4■□□□□ 0.7
CD40LGP29965 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CD40LGP29965 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CD40LGP29965 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.39■□□□□ 0.7
CD40LGP29965 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.39■□□□□ 0.69
CD40LGP29965 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CD40LGP29965 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CD40LGP29965 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD40LGP29965 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD40LGP29965 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CD40LGP29965 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CD40LGP29965 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.39■□□□□ 0.69
CD40LGP29965 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.39■□□□□ 0.69
CD40LGP29965 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CD40LGP29965 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.39■□□□□ 0.69
CD40LGP29965 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CD40LGP29965 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
CD40LGP29965 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CD40LGP29965 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.38■□□□□ 0.69
CD40LGP29965 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.38■□□□□ 0.69
CD40LGP29965 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.38■□□□□ 0.69
CD40LGP29965 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.38■□□□□ 0.69
CD40LGP29965 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CD40LGP29965 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.38■□□□□ 0.69
CD40LGP29965 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.38■□□□□ 0.69
CD40LGP29965 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CD40LGP29965 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40LGP29965 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40LGP29965 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.37■□□□□ 0.69
CD40LGP29965 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40LGP29965 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD40LGP29965 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.37■□□□□ 0.69
CD40LGP29965 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40LGP29965 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms