Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
CD40P25942 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.99■□□□□ 0.63
CD40P25942 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.99■□□□□ 0.63
CD40P25942 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.99■□□□□ 0.63
CD40P25942 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.99■□□□□ 0.63
CD40P25942 AC087239.1-201ENST00000622671 572 ntBASIC18.99■□□□□ 0.63
CD40P25942 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.99■□□□□ 0.63
CD40P25942 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD40P25942 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.98■□□□□ 0.63
CD40P25942 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.98■□□□□ 0.63
CD40P25942 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD40P25942 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.98■□□□□ 0.63
CD40P25942 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD40P25942 AL031602.1-201ENST00000633169 911 ntBASIC18.98■□□□□ 0.63
CD40P25942 AC105233.4-201ENST00000642045 216 ntBASIC18.98■□□□□ 0.63
CD40P25942 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD40P25942 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CD40P25942 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD40P25942 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.98■□□□□ 0.63
CD40P25942 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD40P25942 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD40P25942 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD40P25942 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.97■□□□□ 0.63
CD40P25942 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.97■□□□□ 0.63
CD40P25942 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.97■□□□□ 0.63
CD40P25942 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.97■□□□□ 0.63
CD40P25942 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CD40P25942 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.97■□□□□ 0.63
CD40P25942 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD40P25942 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CD40P25942 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CD40P25942 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CD40P25942 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CD40P25942 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.96■□□□□ 0.63
CD40P25942 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CD40P25942 AC123595.1-201ENST00000440769 1046 ntBASIC18.96■□□□□ 0.63
CD40P25942 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 AC010141.3-201ENST00000456659 717 ntBASIC18.96■□□□□ 0.63
CD40P25942 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.96■□□□□ 0.63
CD40P25942 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD40P25942 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.96■□□□□ 0.63
CD40P25942 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.96■□□□□ 0.63
CD40P25942 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.95■□□□□ 0.62
CD40P25942 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.95■□□□□ 0.62
CD40P25942 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CD40P25942 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.95■□□□□ 0.62
CD40P25942 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.95■□□□□ 0.62
CD40P25942 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.95■□□□□ 0.62
CD40P25942 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.95■□□□□ 0.62
CD40P25942 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.95■□□□□ 0.62
CD40P25942 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.95■□□□□ 0.62
CD40P25942 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.95■□□□□ 0.62
CD40P25942 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CD40P25942 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CD40P25942 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CD40P25942 AC034268.1-201ENST00000441047 882 ntBASIC18.94■□□□□ 0.62
CD40P25942 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.94■□□□□ 0.62
CD40P25942 AL162430.1-201ENST00000480705 870 ntBASIC18.94■□□□□ 0.62
CD40P25942 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.94■□□□□ 0.62
CD40P25942 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.94■□□□□ 0.62
CD40P25942 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.94■□□□□ 0.62
CD40P25942 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.94■□□□□ 0.62
CD40P25942 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms