Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NR4A1P22736 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
NR4A1P22736 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.27■□□□□ 0.84
NR4A1P22736 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NR4A1P22736 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NR4A1P22736 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
NR4A1P22736 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NR4A1P22736 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.27■□□□□ 0.83
NR4A1P22736 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NR4A1P22736 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NR4A1P22736 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NR4A1P22736 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
NR4A1P22736 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.26■□□□□ 0.83
NR4A1P22736 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
NR4A1P22736 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NR4A1P22736 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.26■□□□□ 0.83
NR4A1P22736 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.25■□□□□ 0.83
NR4A1P22736 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
NR4A1P22736 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
NR4A1P22736 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A1P22736 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.25■□□□□ 0.83
NR4A1P22736 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A1P22736 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A1P22736 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A1P22736 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NR4A1P22736 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.25■□□□□ 0.83
NR4A1P22736 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NR4A1P22736 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NR4A1P22736 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NR4A1P22736 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NR4A1P22736 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
NR4A1P22736 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.23■□□□□ 0.83
NR4A1P22736 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.23■□□□□ 0.83
NR4A1P22736 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A1P22736 AC139530.1-201ENST00000575312 1977 ntBASIC20.23■□□□□ 0.83
NR4A1P22736 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.23■□□□□ 0.83
NR4A1P22736 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A1P22736 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.23■□□□□ 0.83
NR4A1P22736 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A1P22736 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.23■□□□□ 0.83
NR4A1P22736 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.23■□□□□ 0.83
NR4A1P22736 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.23■□□□□ 0.83
NR4A1P22736 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.23■□□□□ 0.83
NR4A1P22736 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.23■□□□□ 0.83
NR4A1P22736 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.23■□□□□ 0.83
NR4A1P22736 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NR4A1P22736 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A1P22736 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A1P22736 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NR4A1P22736 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 ESRRAP2-201ENST00000418437 1549 ntBASIC20.22■□□□□ 0.83
NR4A1P22736 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 AC090877.2-201ENST00000558441 1738 ntBASIC20.22■□□□□ 0.83
NR4A1P22736 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 AC092053.2-201ENST00000640557 1818 ntBASIC20.22■□□□□ 0.83
NR4A1P22736 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NR4A1P22736 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NR4A1P22736 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NR4A1P22736 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
NR4A1P22736 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR4A1P22736 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
NR4A1P22736 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.21■□□□□ 0.83
NR4A1P22736 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NR4A1P22736 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR4A1P22736 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NR4A1P22736 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NR4A1P22736 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
NR4A1P22736 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NR4A1P22736 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms