Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.75■□□□□ 0.91
NCK1P16333 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCK1P16333 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NCK1P16333 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCK1P16333 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NCK1P16333 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NCK1P16333 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCK1P16333 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.74■□□□□ 0.91
NCK1P16333 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.74■□□□□ 0.91
NCK1P16333 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCK1P16333 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NCK1P16333 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.74■□□□□ 0.91
NCK1P16333 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCK1P16333 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NCK1P16333 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCK1P16333 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NCK1P16333 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
NCK1P16333 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.73■□□□□ 0.91
NCK1P16333 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.73■□□□□ 0.91
NCK1P16333 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NCK1P16333 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NCK1P16333 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCK1P16333 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NCK1P16333 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCK1P16333 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCK1P16333 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCK1P16333 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCK1P16333 KRT18P24-201ENST00000344739 1156 ntBASIC20.72■□□□□ 0.91
NCK1P16333 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NCK1P16333 AC005229.4-201ENST00000610085 2198 ntBASIC20.72■□□□□ 0.91
NCK1P16333 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.71■□□□□ 0.91
NCK1P16333 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.71■□□□□ 0.91
NCK1P16333 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 SLC25A24-204ENST00000569674 2357 ntBASIC20.71■□□□□ 0.91
NCK1P16333 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.71■□□□□ 0.91
NCK1P16333 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.71■□□□□ 0.91
NCK1P16333 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 BHLHE23-202ENST00000612929 1109 ntBASIC20.71■□□□□ 0.91
NCK1P16333 PVT1_1.1-201ENST00000615125 194 ntBASIC20.71■□□□□ 0.91
NCK1P16333 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NCK1P16333 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
NCK1P16333 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NCK1P16333 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.7■□□□□ 0.9
NCK1P16333 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.7■□□□□ 0.9
NCK1P16333 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.7■□□□□ 0.9
NCK1P16333 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NCK1P16333 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NCK1P16333 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NCK1P16333 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.69■□□□□ 0.9
NCK1P16333 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.69■□□□□ 0.9
NCK1P16333 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.69■□□□□ 0.9
NCK1P16333 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.69■□□□□ 0.9
NCK1P16333 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NCK1P16333 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NCK1P16333 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.69■□□□□ 0.9
NCK1P16333 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NCK1P16333 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NCK1P16333 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.68■□□□□ 0.9
NCK1P16333 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NCK1P16333 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.68■□□□□ 0.9
NCK1P16333 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.68■□□□□ 0.9
NCK1P16333 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCK1P16333 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NCK1P16333 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCK1P16333 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.67■□□□□ 0.9
NCK1P16333 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.67■□□□□ 0.9
NCK1P16333 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
NCK1P16333 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms