Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HOXC6P09630 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
HOXC6P09630 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HOXC6P09630 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.09■■□□□ 1.61
HOXC6P09630 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.09■■□□□ 1.61
HOXC6P09630 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.09■■□□□ 1.61
HOXC6P09630 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.09■■□□□ 1.61
HOXC6P09630 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
HOXC6P09630 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HOXC6P09630 KRT19P1-201ENST00000405746 1186 ntBASIC25.08■■□□□ 1.61
HOXC6P09630 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.08■■□□□ 1.61
HOXC6P09630 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.08■■□□□ 1.61
HOXC6P09630 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.08■■□□□ 1.61
HOXC6P09630 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.08■■□□□ 1.61
HOXC6P09630 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.08■■□□□ 1.61
HOXC6P09630 AC104771.1-201ENST00000603335 964 ntBASIC25.08■■□□□ 1.61
HOXC6P09630 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.08■■□□□ 1.61
HOXC6P09630 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
HOXC6P09630 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.6
HOXC6P09630 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.07■■□□□ 1.6
HOXC6P09630 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.07■■□□□ 1.6
HOXC6P09630 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.07■■□□□ 1.6
HOXC6P09630 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HOXC6P09630 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.06■■□□□ 1.6
HOXC6P09630 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.06■■□□□ 1.6
HOXC6P09630 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HOXC6P09630 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
HOXC6P09630 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
HOXC6P09630 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.05■■□□□ 1.6
HOXC6P09630 CROCCP5-201ENST00000436658 830 ntBASIC25.05■■□□□ 1.6
HOXC6P09630 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.05■■□□□ 1.6
HOXC6P09630 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.05■■□□□ 1.6
HOXC6P09630 SMUG1P1-201ENST00000590640 811 ntBASIC25.05■■□□□ 1.6
HOXC6P09630 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.05■■□□□ 1.6
HOXC6P09630 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
HOXC6P09630 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
HOXC6P09630 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.04■■□□□ 1.6
HOXC6P09630 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
HOXC6P09630 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HOXC6P09630 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
HOXC6P09630 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.04■■□□□ 1.6
HOXC6P09630 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC25.04■■□□□ 1.6
HOXC6P09630 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.04■■□□□ 1.6
HOXC6P09630 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.04■■□□□ 1.6
HOXC6P09630 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HOXC6P09630 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
HOXC6P09630 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HOXC6P09630 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HOXC6P09630 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.03■■□□□ 1.6
HOXC6P09630 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.03■■□□□ 1.6
HOXC6P09630 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.03■■□□□ 1.6
HOXC6P09630 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
HOXC6P09630 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.03■■□□□ 1.6
HOXC6P09630 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.03■■□□□ 1.6
HOXC6P09630 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
HOXC6P09630 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
HOXC6P09630 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
HOXC6P09630 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.02■■□□□ 1.6
HOXC6P09630 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HOXC6P09630 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.02■■□□□ 1.6
HOXC6P09630 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.01■■□□□ 1.59
HOXC6P09630 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HOXC6P09630 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
HOXC6P09630 KRT18P11-201ENST00000435214 1283 ntBASIC25.01■■□□□ 1.59
HOXC6P09630 NCF1B-203ENST00000435988 1254 ntBASIC25.01■■□□□ 1.59
HOXC6P09630 AC010141.3-201ENST00000456659 717 ntBASIC25.01■■□□□ 1.59
HOXC6P09630 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.01■■□□□ 1.59
HOXC6P09630 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HOXC6P09630 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HOXC6P09630 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
HOXC6P09630 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.01■■□□□ 1.59
HOXC6P09630 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HOXC6P09630 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HOXC6P09630 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25■■□□□ 1.59
HOXC6P09630 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HOXC6P09630 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HOXC6P09630 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HOXC6P09630 AC006970.2-201ENST00000450065 779 ntBASIC25■■□□□ 1.59
HOXC6P09630 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms