Protein–RNA interactions for Protein: P07358

C8B, Complement component C8 beta chain, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C8BP07358 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C8BP07358 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.89■□□□□ 0.93
C8BP07358 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.89■□□□□ 0.93
C8BP07358 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
C8BP07358 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C8BP07358 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C8BP07358 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C8BP07358 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
C8BP07358 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.88■□□□□ 0.93
C8BP07358 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.88■□□□□ 0.93
C8BP07358 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C8BP07358 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.87■□□□□ 0.93
C8BP07358 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C8BP07358 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
C8BP07358 AC004448.1-201ENST00000458332 883 ntBASIC20.87■□□□□ 0.93
C8BP07358 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C8BP07358 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.87■□□□□ 0.93
C8BP07358 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
C8BP07358 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C8BP07358 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C8BP07358 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C8BP07358 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C8BP07358 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.87■□□□□ 0.93
C8BP07358 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C8BP07358 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.86■□□□□ 0.93
C8BP07358 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.86■□□□□ 0.93
C8BP07358 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C8BP07358 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C8BP07358 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.86■□□□□ 0.93
C8BP07358 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
C8BP07358 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C8BP07358 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C8BP07358 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
C8BP07358 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
C8BP07358 AC005229.4-201ENST00000610085 2198 ntBASIC20.85■□□□□ 0.93
C8BP07358 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C8BP07358 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.85■□□□□ 0.93
C8BP07358 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.85■□□□□ 0.93
C8BP07358 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.85■□□□□ 0.93
C8BP07358 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.85■□□□□ 0.93
C8BP07358 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C8BP07358 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C8BP07358 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.85■□□□□ 0.93
C8BP07358 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
C8BP07358 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.84■□□□□ 0.93
C8BP07358 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.84■□□□□ 0.93
C8BP07358 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.84■□□□□ 0.93
C8BP07358 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.84■□□□□ 0.93
C8BP07358 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C8BP07358 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
C8BP07358 AL033527.3-201ENST00000566366 1196 ntBASIC20.84■□□□□ 0.93
C8BP07358 MIR4508-201ENST00000584178 70 ntBASIC20.84■□□□□ 0.93
C8BP07358 AC010980.1-201ENST00000587192 1142 ntBASIC20.84■□□□□ 0.93
C8BP07358 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
C8BP07358 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.83■□□□□ 0.93
C8BP07358 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C8BP07358 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C8BP07358 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
C8BP07358 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C8BP07358 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.83■□□□□ 0.93
C8BP07358 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.83■□□□□ 0.93
C8BP07358 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.83■□□□□ 0.93
C8BP07358 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C8BP07358 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.83■□□□□ 0.92
C8BP07358 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C8BP07358 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
C8BP07358 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
C8BP07358 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C8BP07358 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.82■□□□□ 0.92
C8BP07358 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C8BP07358 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C8BP07358 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C8BP07358 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C8BP07358 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C8BP07358 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.81■□□□□ 0.92
C8BP07358 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
C8BP07358 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C8BP07358 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
C8BP07358 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C8BP07358 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C8BP07358 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C8BP07358 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.8■□□□□ 0.92
C8BP07358 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.8■□□□□ 0.92
C8BP07358 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
C8BP07358 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C8BP07358 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms