Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC139795.1-202ENST00000500444 432 ntBASIC16.71■□□□□ 0.27
TCRAP04437 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.71■□□□□ 0.27
TCRAP04437 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRAP04437 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRAP04437 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRAP04437 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRAP04437 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TCRAP04437 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TCRAP04437 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TCRAP04437 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRAP04437 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRAP04437 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRAP04437 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRAP04437 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TCRAP04437 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRAP04437 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRAP04437 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRAP04437 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRAP04437 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRAP04437 MIR4281-201ENST00000580852 62 ntBASIC16.7■□□□□ 0.26
TCRAP04437 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TCRAP04437 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TCRAP04437 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TCRAP04437 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRAP04437 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRAP04437 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TCRAP04437 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRAP04437 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TCRAP04437 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRAP04437 U85056.1-201ENST00000616429 682 ntBASIC16.69■□□□□ 0.26
TCRAP04437 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRAP04437 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TCRAP04437 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TCRAP04437 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRAP04437 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRAP04437 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.68■□□□□ 0.26
TCRAP04437 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRAP04437 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRAP04437 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 THA1P-201ENST00000590384 1145 ntBASIC16.68■□□□□ 0.26
TCRAP04437 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRAP04437 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRAP04437 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRAP04437 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRAP04437 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRAP04437 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TCRAP04437 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TCRAP04437 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRAP04437 KRT18P24-201ENST00000344739 1156 ntBASIC16.67■□□□□ 0.26
TCRAP04437 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRAP04437 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRAP04437 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.67■□□□□ 0.26
TCRAP04437 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TCRAP04437 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRAP04437 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRAP04437 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRAP04437 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRAP04437 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TCRAP04437 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TCRAP04437 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TCRAP04437 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TCRAP04437 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRAP04437 LINC01960-201ENST00000563759 1884 ntBASIC16.65■□□□□ 0.26
TCRAP04437 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.65■□□□□ 0.26
TCRAP04437 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TCRAP04437 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRAP04437 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TCRAP04437 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.65■□□□□ 0.26
TCRAP04437 KRT18P60-201ENST00000312876 1297 ntBASIC16.65■□□□□ 0.26
TCRAP04437 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TCRAP04437 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TCRAP04437 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.65■□□□□ 0.26
TCRAP04437 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms