Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.2■■□□□ 1.3
BEST1O76090 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.2■■□□□ 1.3
BEST1O76090 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
BEST1O76090 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.19■■□□□ 1.3
BEST1O76090 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.19■■□□□ 1.3
BEST1O76090 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BEST1O76090 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BEST1O76090 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BEST1O76090 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.19■■□□□ 1.3
BEST1O76090 IGHV3-19-201ENST00000521488 291 ntBASIC23.19■■□□□ 1.3
BEST1O76090 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BEST1O76090 AL031602.1-201ENST00000633169 911 ntBASIC23.19■■□□□ 1.3
BEST1O76090 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.19■■□□□ 1.3
BEST1O76090 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
BEST1O76090 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BEST1O76090 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BEST1O76090 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.18■■□□□ 1.3
BEST1O76090 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
BEST1O76090 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.18■■□□□ 1.3
BEST1O76090 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
BEST1O76090 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.18■■□□□ 1.3
BEST1O76090 AP005435.1-201ENST00000529293 1178 ntBASIC23.18■■□□□ 1.3
BEST1O76090 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.18■■□□□ 1.3
BEST1O76090 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
BEST1O76090 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.18■■□□□ 1.3
BEST1O76090 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
BEST1O76090 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.17■■□□□ 1.3
BEST1O76090 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
BEST1O76090 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
BEST1O76090 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.17■■□□□ 1.3
BEST1O76090 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.17■■□□□ 1.3
BEST1O76090 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BEST1O76090 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BEST1O76090 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.16■■□□□ 1.3
BEST1O76090 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.16■■□□□ 1.3
BEST1O76090 MIR935-201ENST00000401179 91 ntBASIC23.16■■□□□ 1.3
BEST1O76090 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.16■■□□□ 1.3
BEST1O76090 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.16■■□□□ 1.3
BEST1O76090 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.16■■□□□ 1.3
BEST1O76090 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.16■■□□□ 1.3
BEST1O76090 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
BEST1O76090 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.16■■□□□ 1.3
BEST1O76090 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
BEST1O76090 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BEST1O76090 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BEST1O76090 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
BEST1O76090 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.15■■□□□ 1.3
BEST1O76090 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.15■■□□□ 1.3
BEST1O76090 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.15■■□□□ 1.3
BEST1O76090 IRS3P-201ENST00000223076 1006 ntBASIC23.15■■□□□ 1.3
BEST1O76090 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.15■■□□□ 1.3
BEST1O76090 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.15■■□□□ 1.3
BEST1O76090 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
BEST1O76090 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.15■■□□□ 1.3
BEST1O76090 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
BEST1O76090 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.14■■□□□ 1.3
BEST1O76090 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
BEST1O76090 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
BEST1O76090 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BEST1O76090 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
BEST1O76090 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BEST1O76090 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.14■■□□□ 1.29
BEST1O76090 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.14■■□□□ 1.29
BEST1O76090 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.14■■□□□ 1.29
BEST1O76090 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BEST1O76090 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BEST1O76090 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.13■■□□□ 1.29
BEST1O76090 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BEST1O76090 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
BEST1O76090 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.13■■□□□ 1.29
BEST1O76090 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.13■■□□□ 1.29
BEST1O76090 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.13■■□□□ 1.29
BEST1O76090 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.13■■□□□ 1.29
BEST1O76090 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
BEST1O76090 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.13■■□□□ 1.29
BEST1O76090 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BEST1O76090 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BEST1O76090 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
BEST1O76090 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.12■■□□□ 1.29
BEST1O76090 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BEST1O76090 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms