Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDUFS3O75489 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
NDUFS3O75489 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDUFS3O75489 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.89■■□□□ 1.1
NDUFS3O75489 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDUFS3O75489 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.89■■□□□ 1.1
NDUFS3O75489 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDUFS3O75489 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NDUFS3O75489 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
NDUFS3O75489 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NDUFS3O75489 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.89■■□□□ 1.09
NDUFS3O75489 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.89■■□□□ 1.09
NDUFS3O75489 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.89■■□□□ 1.09
NDUFS3O75489 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.89■■□□□ 1.09
NDUFS3O75489 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.89■■□□□ 1.09
NDUFS3O75489 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NDUFS3O75489 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NDUFS3O75489 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
NDUFS3O75489 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NDUFS3O75489 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.88■■□□□ 1.09
NDUFS3O75489 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.88■■□□□ 1.09
NDUFS3O75489 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.88■■□□□ 1.09
NDUFS3O75489 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.88■■□□□ 1.09
NDUFS3O75489 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.88■■□□□ 1.09
NDUFS3O75489 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDUFS3O75489 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NDUFS3O75489 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDUFS3O75489 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.87■■□□□ 1.09
NDUFS3O75489 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.87■■□□□ 1.09
NDUFS3O75489 MIR4466-201ENST00000606121 54 ntBASIC21.87■■□□□ 1.09
NDUFS3O75489 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.87■■□□□ 1.09
NDUFS3O75489 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.87■■□□□ 1.09
NDUFS3O75489 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.87■■□□□ 1.09
NDUFS3O75489 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.87■■□□□ 1.09
NDUFS3O75489 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NDUFS3O75489 LINC01960-201ENST00000563759 1884 ntBASIC21.87■■□□□ 1.09
NDUFS3O75489 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NDUFS3O75489 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NDUFS3O75489 AC127496.7-201ENST00000625110 1798 ntBASIC21.87■■□□□ 1.09
NDUFS3O75489 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NDUFS3O75489 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NDUFS3O75489 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDUFS3O75489 AC087742.1-201ENST00000575880 1738 ntBASIC21.86■■□□□ 1.09
NDUFS3O75489 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.86■■□□□ 1.09
NDUFS3O75489 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDUFS3O75489 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NDUFS3O75489 AC131281.2-201ENST00000520478 145 ntBASIC21.86■■□□□ 1.09
NDUFS3O75489 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
NDUFS3O75489 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NDUFS3O75489 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDUFS3O75489 AC133637.1-201ENST00000624115 1537 ntBASIC21.85■■□□□ 1.09
NDUFS3O75489 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
NDUFS3O75489 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDUFS3O75489 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDUFS3O75489 AC131212.1-201ENST00000613771 668 ntBASIC21.85■■□□□ 1.09
NDUFS3O75489 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDUFS3O75489 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDUFS3O75489 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFS3O75489 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NDUFS3O75489 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.84■■□□□ 1.09
NDUFS3O75489 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFS3O75489 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFS3O75489 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.84■■□□□ 1.09
NDUFS3O75489 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFS3O75489 MIR3181-201ENST00000578512 73 ntBASIC21.84■■□□□ 1.09
NDUFS3O75489 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFS3O75489 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDUFS3O75489 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NDUFS3O75489 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NDUFS3O75489 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NDUFS3O75489 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.83■■□□□ 1.09
NDUFS3O75489 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
NDUFS3O75489 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NDUFS3O75489 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NDUFS3O75489 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
NDUFS3O75489 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NDUFS3O75489 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NDUFS3O75489 AC079834.2-201ENST00000609776 1949 ntBASIC21.82■■□□□ 1.08
NDUFS3O75489 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NDUFS3O75489 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDUFS3O75489 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
NDUFS3O75489 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NDUFS3O75489 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.82■■□□□ 1.08
NDUFS3O75489 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NDUFS3O75489 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDUFS3O75489 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDUFS3O75489 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms