Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC091305.1-201ENST00000479476 895 ntBASIC21.15■□□□□ 0.98
CNOT3O75175 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT3O75175 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.15■□□□□ 0.98
CNOT3O75175 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.15■□□□□ 0.98
CNOT3O75175 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNOT3O75175 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT3O75175 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT3O75175 ABCB10P4-201ENST00000566803 2184 ntBASIC21.14■□□□□ 0.98
CNOT3O75175 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT3O75175 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNOT3O75175 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CNOT3O75175 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT3O75175 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT3O75175 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.14■□□□□ 0.97
CNOT3O75175 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT3O75175 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.14■□□□□ 0.97
CNOT3O75175 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.14■□□□□ 0.97
CNOT3O75175 AC008764.7-201ENST00000593779 1081 ntBASIC21.14■□□□□ 0.97
CNOT3O75175 pRNA.6-201ENST00000610482 90 ntBASIC21.14■□□□□ 0.97
CNOT3O75175 CA15P2-201ENST00000611168 834 ntBASIC21.14■□□□□ 0.97
CNOT3O75175 pRNA.5-201ENST00000612139 90 ntBASIC21.14■□□□□ 0.97
CNOT3O75175 pRNA.11-201ENST00000618423 90 ntBASIC21.14■□□□□ 0.97
CNOT3O75175 pRNA.13-201ENST00000619112 90 ntBASIC21.14■□□□□ 0.97
CNOT3O75175 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.14■□□□□ 0.97
CNOT3O75175 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CNOT3O75175 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CNOT3O75175 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CNOT3O75175 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNOT3O75175 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT3O75175 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT3O75175 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.13■□□□□ 0.97
CNOT3O75175 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.13■□□□□ 0.97
CNOT3O75175 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT3O75175 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
CNOT3O75175 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT3O75175 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CNOT3O75175 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.13■□□□□ 0.97
CNOT3O75175 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CNOT3O75175 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CNOT3O75175 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNOT3O75175 RASA4CP-201ENST00000424092 1398 ntBASIC21.12■□□□□ 0.97
CNOT3O75175 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.12■□□□□ 0.97
CNOT3O75175 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
CNOT3O75175 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CNOT3O75175 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT3O75175 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.12■□□□□ 0.97
CNOT3O75175 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.12■□□□□ 0.97
CNOT3O75175 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CNOT3O75175 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT3O75175 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT3O75175 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CNOT3O75175 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNOT3O75175 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT3O75175 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT3O75175 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CNOT3O75175 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.11■□□□□ 0.97
CNOT3O75175 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNOT3O75175 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT3O75175 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CNOT3O75175 AC099791.1-201ENST00000416440 715 ntBASIC21.11■□□□□ 0.97
CNOT3O75175 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT3O75175 AC027682.1-201ENST00000562846 899 ntBASIC21.11■□□□□ 0.97
CNOT3O75175 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNOT3O75175 C9orf163-202ENST00000624034 2573 ntBASIC21.11■□□□□ 0.97
CNOT3O75175 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.11■□□□□ 0.97
CNOT3O75175 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNOT3O75175 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CNOT3O75175 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.1■□□□□ 0.97
CNOT3O75175 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CNOT3O75175 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNOT3O75175 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
CNOT3O75175 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 AC026271.2-201ENST00000428091 497 ntBASIC21.09■□□□□ 0.97
CNOT3O75175 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 RARRES2P6-201ENST00000567333 442 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms