Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TBC1D4O60343 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TBC1D4O60343 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.37■■□□□ 1.33
TBC1D4O60343 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TBC1D4O60343 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.37■■□□□ 1.33
TBC1D4O60343 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TBC1D4O60343 LINC02228-203ENST00000641970 1355 ntBASIC23.37■■□□□ 1.33
TBC1D4O60343 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TBC1D4O60343 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.36■■□□□ 1.33
TBC1D4O60343 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.36■■□□□ 1.33
TBC1D4O60343 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.36■■□□□ 1.33
TBC1D4O60343 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TBC1D4O60343 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.35■■□□□ 1.33
TBC1D4O60343 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TBC1D4O60343 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.35■■□□□ 1.33
TBC1D4O60343 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
TBC1D4O60343 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.35■■□□□ 1.33
TBC1D4O60343 KRT18P14-201ENST00000534205 1250 ntBASIC23.35■■□□□ 1.33
TBC1D4O60343 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TBC1D4O60343 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.34■■□□□ 1.33
TBC1D4O60343 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TBC1D4O60343 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.34■■□□□ 1.33
TBC1D4O60343 AC090192.1-201ENST00000517740 490 ntBASIC23.34■■□□□ 1.33
TBC1D4O60343 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.34■■□□□ 1.33
TBC1D4O60343 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TBC1D4O60343 RARRES2P11-201ENST00000635158 484 ntBASIC23.34■■□□□ 1.33
TBC1D4O60343 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.34■■□□□ 1.33
TBC1D4O60343 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TBC1D4O60343 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
TBC1D4O60343 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
TBC1D4O60343 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D4O60343 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D4O60343 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D4O60343 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
TBC1D4O60343 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TBC1D4O60343 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.33■■□□□ 1.33
TBC1D4O60343 IKBKGP1-201ENST00000612193 1073 ntBASIC23.33■■□□□ 1.33
TBC1D4O60343 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
TBC1D4O60343 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.33■■□□□ 1.32
TBC1D4O60343 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TBC1D4O60343 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.32■■□□□ 1.32
TBC1D4O60343 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D4O60343 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D4O60343 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D4O60343 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TBC1D4O60343 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TBC1D4O60343 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.32■■□□□ 1.32
TBC1D4O60343 TPRG1LP1-201ENST00000598702 760 ntBASIC23.32■■□□□ 1.32
TBC1D4O60343 AC092437.1-201ENST00000624794 1048 ntBASIC23.32■■□□□ 1.32
TBC1D4O60343 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D4O60343 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TBC1D4O60343 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D4O60343 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D4O60343 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D4O60343 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TBC1D4O60343 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.31■■□□□ 1.32
TBC1D4O60343 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.31■■□□□ 1.32
TBC1D4O60343 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.31■■□□□ 1.32
TBC1D4O60343 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TBC1D4O60343 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D4O60343 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D4O60343 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TBC1D4O60343 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TBC1D4O60343 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.3■■□□□ 1.32
TBC1D4O60343 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.3■■□□□ 1.32
TBC1D4O60343 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
TBC1D4O60343 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D4O60343 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TBC1D4O60343 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D4O60343 AC010141.3-201ENST00000456659 717 ntBASIC23.3■■□□□ 1.32
TBC1D4O60343 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.3■■□□□ 1.32
TBC1D4O60343 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D4O60343 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.3■■□□□ 1.32
TBC1D4O60343 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D4O60343 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.3■■□□□ 1.32
TBC1D4O60343 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D4O60343 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TBC1D4O60343 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D4O60343 ANOS2P-203ENST00000472227 1816 ntBASIC23.29■■□□□ 1.32
TBC1D4O60343 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms