Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA12O60330 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 AC068473.5-201ENST00000616428 2072 ntBASIC21.8■■□□□ 1.08
PCDHGA12O60330 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGA12O60330 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA12O60330 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA12O60330 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA12O60330 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA12O60330 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGA12O60330 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCDHGA12O60330 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA12O60330 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA12O60330 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA12O60330 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA12O60330 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHGA12O60330 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.78■■□□□ 1.08
PCDHGA12O60330 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDHGA12O60330 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGA12O60330 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.78■■□□□ 1.08
PCDHGA12O60330 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PCDHGA12O60330 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGA12O60330 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA12O60330 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA12O60330 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHGA12O60330 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA12O60330 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA12O60330 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDHGA12O60330 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA12O60330 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA12O60330 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA12O60330 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGA12O60330 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHGA12O60330 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHGA12O60330 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA12O60330 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHGA12O60330 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHGA12O60330 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA12O60330 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA12O60330 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA12O60330 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA12O60330 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHGA12O60330 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHGA12O60330 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGA12O60330 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGA12O60330 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA12O60330 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGA12O60330 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA12O60330 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA12O60330 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA12O60330 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 AC105233.4-201ENST00000642045 216 ntBASIC21.75■■□□□ 1.07
PCDHGA12O60330 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGA12O60330 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGA12O60330 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA12O60330 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA12O60330 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA12O60330 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA12O60330 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHGA12O60330 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA12O60330 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA12O60330 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGA12O60330 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA12O60330 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGA12O60330 LINC00543-201ENST00000567234 1845 ntBASIC21.73■■□□□ 1.07
PCDHGA12O60330 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA12O60330 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA12O60330 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGA12O60330 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDHGA12O60330 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms