Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.81■□□□□ 0.76
SSX4O60224 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX4O60224 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SSX4O60224 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.81■□□□□ 0.76
SSX4O60224 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSX4O60224 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SSX4O60224 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 AF131216.4-201ENST00000638924 1588 ntBASIC19.8■□□□□ 0.76
SSX4O60224 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX4O60224 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSX4O60224 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SSX4O60224 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.8■□□□□ 0.76
SSX4O60224 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SSX4O60224 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SSX4O60224 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.79■□□□□ 0.76
SSX4O60224 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX4O60224 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSX4O60224 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.79■□□□□ 0.76
SSX4O60224 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.78■□□□□ 0.76
SSX4O60224 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX4O60224 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.78■□□□□ 0.76
SSX4O60224 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.78■□□□□ 0.76
SSX4O60224 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.78■□□□□ 0.76
SSX4O60224 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SSX4O60224 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SSX4O60224 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSX4O60224 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.78■□□□□ 0.76
SSX4O60224 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX4O60224 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.77■□□□□ 0.76
SSX4O60224 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSX4O60224 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX4O60224 AC092068.2-201ENST00000590491 1708 ntBASIC19.77■□□□□ 0.76
SSX4O60224 AC096631.2-201ENST00000436136 790 ntBASIC19.77■□□□□ 0.76
SSX4O60224 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.77■□□□□ 0.76
SSX4O60224 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.77■□□□□ 0.76
SSX4O60224 MIR4466-201ENST00000606121 54 ntBASIC19.77■□□□□ 0.76
SSX4O60224 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX4O60224 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSX4O60224 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SSX4O60224 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SSX4O60224 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SSX4O60224 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX4O60224 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.76■□□□□ 0.75
SSX4O60224 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.76■□□□□ 0.75
SSX4O60224 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
SSX4O60224 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSX4O60224 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX4O60224 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SSX4O60224 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SSX4O60224 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SSX4O60224 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSX4O60224 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.75■□□□□ 0.75
SSX4O60224 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 AC242852.2-201ENST00000615738 1807 ntBASIC19.74■□□□□ 0.75
SSX4O60224 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSX4O60224 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SSX4O60224 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 AC110285.6-201ENST00000617652 491 ntBASIC19.74■□□□□ 0.75
SSX4O60224 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.74■□□□□ 0.75
SSX4O60224 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SSX4O60224 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSX4O60224 AC090877.2-201ENST00000558441 1738 ntBASIC19.73■□□□□ 0.75
SSX4O60224 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SSX4O60224 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSX4O60224 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.73■□□□□ 0.75
SSX4O60224 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX4O60224 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSX4O60224 FBXW4P1-201ENST00000426721 2239 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms