Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 LINC00526-201ENST00000581067 1875 ntBASIC20.45■□□□□ 0.86
AP3D1O14617 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP3D1O14617 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP3D1O14617 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
AP3D1O14617 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.44■□□□□ 0.86
AP3D1O14617 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
AP3D1O14617 GUSBP5-201ENST00000418136 578 ntBASIC20.44■□□□□ 0.86
AP3D1O14617 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.44■□□□□ 0.86
AP3D1O14617 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.44■□□□□ 0.86
AP3D1O14617 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.44■□□□□ 0.86
AP3D1O14617 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP3D1O14617 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP3D1O14617 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
AP3D1O14617 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.44■□□□□ 0.86
AP3D1O14617 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.44■□□□□ 0.86
AP3D1O14617 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP3D1O14617 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
AP3D1O14617 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 SLC25A24-204ENST00000569674 2357 ntBASIC20.43■□□□□ 0.86
AP3D1O14617 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 KRT16P3-201ENST00000439127 1283 ntBASIC20.43■□□□□ 0.86
AP3D1O14617 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.43■□□□□ 0.86
AP3D1O14617 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3D1O14617 AC009102.2-201ENST00000606772 1639 ntBASIC20.42■□□□□ 0.86
AP3D1O14617 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3D1O14617 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3D1O14617 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP3D1O14617 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.42■□□□□ 0.86
AP3D1O14617 AC242852.2-201ENST00000615738 1807 ntBASIC20.42■□□□□ 0.86
AP3D1O14617 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.42■□□□□ 0.86
AP3D1O14617 MIR6724-1-201ENST00000616420 92 ntBASIC20.42■□□□□ 0.86
AP3D1O14617 MIR6724-2-201ENST00000616483 92 ntBASIC20.42■□□□□ 0.86
AP3D1O14617 MIR6724-4-201ENST00000617390 92 ntBASIC20.42■□□□□ 0.86
AP3D1O14617 MIR6724-3-201ENST00000622482 92 ntBASIC20.42■□□□□ 0.86
AP3D1O14617 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.42■□□□□ 0.86
AP3D1O14617 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3D1O14617 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
AP3D1O14617 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
AP3D1O14617 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
AP3D1O14617 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
AP3D1O14617 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3D1O14617 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
AP3D1O14617 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3D1O14617 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3D1O14617 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
AP3D1O14617 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.41■□□□□ 0.86
AP3D1O14617 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP3D1O14617 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP3D1O14617 AC127496.7-201ENST00000625110 1798 ntBASIC20.41■□□□□ 0.86
AP3D1O14617 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP3D1O14617 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP3D1O14617 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.4■□□□□ 0.86
AP3D1O14617 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.4■□□□□ 0.86
AP3D1O14617 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
AP3D1O14617 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.4■□□□□ 0.86
AP3D1O14617 LINC01529-204ENST00000636474 1715 ntBASIC20.4■□□□□ 0.86
AP3D1O14617 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3D1O14617 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP3D1O14617 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AP3D1O14617 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP3D1O14617 FP325331.1-202ENST00000623531 1380 ntBASIC20.39■□□□□ 0.85
AP3D1O14617 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP3D1O14617 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3D1O14617 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.39■□□□□ 0.85
AP3D1O14617 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.39■□□□□ 0.85
AP3D1O14617 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3D1O14617 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
AP3D1O14617 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms