Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IFRD1O00458 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.69■■□□□ 1.06
IFRD1O00458 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
IFRD1O00458 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
IFRD1O00458 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
IFRD1O00458 AC133561.4-201ENST00000566112 224 ntBASIC21.68■■□□□ 1.06
IFRD1O00458 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.68■■□□□ 1.06
IFRD1O00458 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IFRD1O00458 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IFRD1O00458 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IFRD1O00458 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
IFRD1O00458 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IFRD1O00458 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.67■■□□□ 1.06
IFRD1O00458 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
IFRD1O00458 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
IFRD1O00458 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
IFRD1O00458 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IFRD1O00458 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IFRD1O00458 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IFRD1O00458 MIR4767-201ENST00000582827 78 ntBASIC21.67■■□□□ 1.06
IFRD1O00458 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
IFRD1O00458 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IFRD1O00458 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
IFRD1O00458 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
IFRD1O00458 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IFRD1O00458 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IFRD1O00458 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
IFRD1O00458 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IFRD1O00458 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IFRD1O00458 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.66■■□□□ 1.06
IFRD1O00458 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.66■■□□□ 1.06
IFRD1O00458 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
IFRD1O00458 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
IFRD1O00458 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
IFRD1O00458 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
IFRD1O00458 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
IFRD1O00458 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFRD1O00458 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFRD1O00458 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.65■■□□□ 1.06
IFRD1O00458 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
IFRD1O00458 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IFRD1O00458 EDA-201ENST00000338901 1233 ntBASIC21.65■■□□□ 1.06
IFRD1O00458 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.65■■□□□ 1.06
IFRD1O00458 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.65■■□□□ 1.06
IFRD1O00458 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IFRD1O00458 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
IFRD1O00458 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IFRD1O00458 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.64■■□□□ 1.06
IFRD1O00458 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IFRD1O00458 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.64■■□□□ 1.06
IFRD1O00458 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFRD1O00458 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IFRD1O00458 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IFRD1O00458 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IFRD1O00458 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.64■■□□□ 1.05
IFRD1O00458 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.64■■□□□ 1.05
IFRD1O00458 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
IFRD1O00458 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFRD1O00458 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
IFRD1O00458 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.63■■□□□ 1.05
IFRD1O00458 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
IFRD1O00458 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.63■■□□□ 1.05
IFRD1O00458 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.63■■□□□ 1.05
IFRD1O00458 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.63■■□□□ 1.05
IFRD1O00458 MIR638-201ENST00000385237 100 ntBASIC21.63■■□□□ 1.05
IFRD1O00458 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.63■■□□□ 1.05
IFRD1O00458 AL355001.2-201ENST00000620617 1191 ntBASIC21.63■■□□□ 1.05
IFRD1O00458 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
IFRD1O00458 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
IFRD1O00458 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
IFRD1O00458 AC004687.1-201ENST00000579003 1625 ntBASIC21.62■■□□□ 1.05
IFRD1O00458 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFRD1O00458 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.62■■□□□ 1.05
IFRD1O00458 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.62■■□□□ 1.05
IFRD1O00458 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFRD1O00458 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IFRD1O00458 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFRD1O00458 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFRD1O00458 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.62■■□□□ 1.05
IFRD1O00458 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.62■■□□□ 1.05
IFRD1O00458 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
IFRD1O00458 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IFRD1O00458 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
IFRD1O00458 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
IFRD1O00458 C1orf229-201ENST00000623686 2258 ntBASIC21.61■■□□□ 1.05
IFRD1O00458 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFRD1O00458 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
IFRD1O00458 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
IFRD1O00458 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
IFRD1O00458 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.61■■□□□ 1.05
IFRD1O00458 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.61■■□□□ 1.05
IFRD1O00458 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms