Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 AC123595.1-201ENST00000440769 1046 ntBASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 AL162430.1-201ENST00000480705 870 ntBASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 AC104564.3-201ENST00000582367 638 ntBASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 AC092666.2-201ENST00000613287 246 ntBASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 AL031602.1-201ENST00000633169 911 ntBASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPVL3A0A0U1RRI6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 AC034268.1-201ENST00000441047 882 ntBASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 AC087239.1-201ENST00000622671 572 ntBASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CENPVL3A0A0U1RRI6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CENPVL3A0A0U1RRI6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 AC010141.3-201ENST00000456659 717 ntBASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CENPVL3A0A0U1RRI6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.82■□□□□ 0.44
CENPVL3A0A0U1RRI6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CENPVL3A0A0U1RRI6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CENPVL3A0A0U1RRI6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms