Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 LINC01532-202ENST00000591143 1948 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 AGGF1P10-201ENST00000635005 2191 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 DNAL4-202ENST00000406199 631 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC14.13□□□□□ -0.15
Q9Y3F1 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 RPSAP46-201ENST00000428316 882 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 HNRNPA1P59-201ENST00000430583 918 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 AC005838.1-201ENST00000430712 233 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 NUDT9P1-201ENST00000477230 745 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC14.13□□□□□ -0.15
Q9Y3F1 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC14.13□□□□□ -0.15
Q9Y3F1 AC239600.1-201ENST00000603201 462 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 AC011458.2-201ENST00000603937 207 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 IPO7-208ENST00000630083 195 ntTSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 AC127526.5-201ENST00000637148 1110 ntBASIC14.13□□□□□ -0.15
Q9Y3F1 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.13□□□□□ -0.15
Q9Y3F1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.13□□□□□ -0.15
Q9Y3F1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q9Y3F1 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Q9Y3F1 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC14.12□□□□□ -0.15
Q9Y3F1 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 SRSF9P1-201ENST00000399149 530 ntBASIC14.12□□□□□ -0.15
Q9Y3F1 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC14.12□□□□□ -0.15
Q9Y3F1 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 AC007255.1-202ENST00000447171 889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 GAPDHP76-201ENST00000512278 976 ntBASIC14.12□□□□□ -0.15
Q9Y3F1 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 AP002383.2-201ENST00000545768 675 ntBASIC14.12□□□□□ -0.15
Q9Y3F1 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC14.12□□□□□ -0.15
Q9Y3F1 RN7SL460P-201ENST00000582806 258 ntBASIC14.12□□□□□ -0.15
Q9Y3F1 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC14.12□□□□□ -0.15
Q9Y3F1 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.12□□□□□ -0.15
Q9Y3F1 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.12□□□□□ -0.15
Q9Y3F1 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q9Y3F1 AL590552.1-201ENST00000623164 1770 ntBASIC14.11□□□□□ -0.15
Q9Y3F1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q9Y3F1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Q9Y3F1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.11□□□□□ -0.15
Q9Y3F1 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC14.11□□□□□ -0.15
Q9Y3F1 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms