Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 AC139491.6-202ENST00000637171 2077 ntBASIC11.74□□□□□ -0.53
APOC1P02654 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 CEP164P1-201ENST00000455142 418 ntBASIC11.74□□□□□ -0.53
APOC1P02654 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
APOC1P02654 AC140113.1-201ENST00000603467 169 ntBASIC11.74□□□□□ -0.53
APOC1P02654 AC084346.2-201ENST00000607097 949 ntBASIC11.74□□□□□ -0.53
APOC1P02654 AF254983.2-201ENST00000612331 135 ntBASIC11.74□□□□□ -0.53
APOC1P02654 AC007718.1-201ENST00000621078 280 ntBASIC11.74□□□□□ -0.53
APOC1P02654 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC11.74□□□□□ -0.53
APOC1P02654 AL139823.1-201ENST00000641871 1225 ntBASIC11.74□□□□□ -0.53
APOC1P02654 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC11.74□□□□□ -0.53
APOC1P02654 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC1P02654 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC1P02654 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC1P02654 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
APOC1P02654 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 SNORD23-201ENST00000408876 110 ntBASIC11.73□□□□□ -0.53
APOC1P02654 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 CSNK1G2P1-201ENST00000442675 955 ntBASIC11.73□□□□□ -0.53
APOC1P02654 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC1P02654 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 MRPL22P1-201ENST00000505398 616 ntBASIC11.73□□□□□ -0.53
APOC1P02654 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC11.73□□□□□ -0.53
APOC1P02654 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC11.73□□□□□ -0.53
APOC1P02654 AC026120.2-201ENST00000617239 309 ntBASIC11.73□□□□□ -0.53
APOC1P02654 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
APOC1P02654 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC1P02654 GPR182-203ENST00000622922 591 ntBASIC11.73□□□□□ -0.53
APOC1P02654 AC124319.4-201ENST00000622931 2161 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms