Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MIR3907-201ENST00000579424 151 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SCN2BO60939 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 CTAGE7P-201ENST00000435712 2436 ntBASIC12.48□□□□□ -0.41
SCN2BO60939 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.48□□□□□ -0.41
SCN2BO60939 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SCN2BO60939 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.47□□□□□ -0.41
SCN2BO60939 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.47□□□□□ -0.41
SCN2BO60939 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SCN2BO60939 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.47□□□□□ -0.41
SCN2BO60939 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SCN2BO60939 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SCN2BO60939 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SCN2BO60939 BCYRN1-201ENST00000418539 200 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC12.47□□□□□ -0.41
SCN2BO60939 AP003170.2-201ENST00000544730 786 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.47□□□□□ -0.41
SCN2BO60939 AL359219.1-201ENST00000556311 934 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.47□□□□□ -0.41
SCN2BO60939 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 CSTP2-201ENST00000610599 398 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 AC087392.5-201ENST00000612517 489 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 AC103691.2-201ENST00000618824 433 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 AC005618.3-201ENST00000624928 458 ntBASIC12.47□□□□□ -0.41
SCN2BO60939 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.47□□□□□ -0.41
SCN2BO60939 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC12.47□□□□□ -0.41
SCN2BO60939 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SCN2BO60939 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC12.47□□□□□ -0.41
SCN2BO60939 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SCN2BO60939 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SCN2BO60939 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SCN2BO60939 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.46□□□□□ -0.41
SCN2BO60939 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SCN2BO60939 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.46□□□□□ -0.41
SCN2BO60939 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 AC091046.1-201ENST00000331871 207 ntBASIC12.46□□□□□ -0.41
SCN2BO60939 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.46□□□□□ -0.41
SCN2BO60939 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC12.46□□□□□ -0.41
SCN2BO60939 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.46□□□□□ -0.41
SCN2BO60939 AL354861.1-201ENST00000445213 355 ntBASIC12.46□□□□□ -0.41
SCN2BO60939 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SCN2BO60939 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC12.46□□□□□ -0.41
SCN2BO60939 TMCO5B-205ENST00000530020 894 ntBASIC12.46□□□□□ -0.41
SCN2BO60939 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms