Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 YAF2-203ENST00000534854 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIMBP3Q9UFD9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 KRT8P27-201ENST00000447301 1457 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 CHRNB1-202ENST00000536404 1623 ntTSL 2 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 OR2A42-201ENST00000391496 933 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 OR2A1-201ENST00000408951 933 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 BPI-202ENST00000417318 1082 ntTSL 5 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 SLC25A39P1-201ENST00000444461 1065 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 RNMTL1P2-201ENST00000454810 951 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 OR2A9P-203ENST00000484189 933 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 OR2A20P-202ENST00000496731 933 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 AC105460.1-201ENST00000509399 830 ntTSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 IST1-215ENST00000538850 1125 ntTSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 CHP1-204ENST00000560397 568 ntTSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 AC025580.2-203ENST00000560647 702 ntTSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 AC137932.1-201ENST00000563087 410 ntTSL 2 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 LINC01228-201ENST00000567966 623 ntTSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 RN7SL408P-201ENST00000577207 296 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 MIR6511A2-201ENST00000611011 67 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 MIR6511A3-201ENST00000615389 67 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 MIR6511A4-201ENST00000615860 67 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 MIR6511A1-201ENST00000617664 67 ntBASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 TRAF3IP2-208ENST00000392556 2188 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 CYP1B1-204ENST00000494864 1479 ntTSL 5 BASIC19.49■□□□□ 0.71
RIMBP3Q9UFD9 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AC011487.2-202ENST00000599707 1356 ntBASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 SNORA5C-201ENST00000364902 137 ntBASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 OOEP-202ENST00000370363 1007 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 RNASE1-204ENST00000412779 896 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AL035587.1-201ENST00000450671 679 ntTSL 3 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 IGHV1-68-201ENST00000519437 352 ntBASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 ENSAP2-201ENST00000554405 352 ntBASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AC009035.1-201ENST00000562900 717 ntTSL 3 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AC010422.2-201ENST00000593554 635 ntTSL 3 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AC138393.1-201ENST00000622033 624 ntTSL 5 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 FAM133B-203ENST00000438306 2434 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 IL1RAP-207ENST00000422485 2048 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC19.48■□□□□ 0.71
RIMBP3Q9UFD9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 PTGR1-201ENST00000309195 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 HMGN2P11-201ENST00000446054 403 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC078850.2-201ENST00000487657 482 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 TIMM10-203ENST00000525587 486 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 MT1E-203ENST00000568293 332 ntTSL 2 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC010531.3-201ENST00000569147 513 ntTSL 4 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 ORAI1-201ENST00000611718 852 ntTSL 5 BASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 MIR1273H-201ENST00000612921 116 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 AC105020.5-201ENST00000614810 423 ntBASIC19.47■□□□□ 0.71
RIMBP3Q9UFD9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms