Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
P04436 AC026271.4-201ENST00000578214 1833 ntBASIC12.04□□□□□ -0.48
P04436 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC12.04□□□□□ -0.48
P04436 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
P04436 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.04□□□□□ -0.48
P04436 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
P04436 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.04□□□□□ -0.48
P04436 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P04436 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P04436 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.03□□□□□ -0.48
P04436 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
P04436 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
P04436 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
P04436 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
P04436 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.03□□□□□ -0.48
P04436 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 NHP2P1-201ENST00000335274 462 ntBASIC12.03□□□□□ -0.48
P04436 RNA5SP84-201ENST00000364740 107 ntBASIC12.03□□□□□ -0.48
P04436 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC12.03□□□□□ -0.48
P04436 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC12.03□□□□□ -0.48
P04436 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.03□□□□□ -0.48
P04436 AC233724.9-201ENST00000511694 407 ntBASIC12.03□□□□□ -0.48
P04436 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC12.03□□□□□ -0.48
P04436 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
P04436 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC12.03□□□□□ -0.48
P04436 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.03□□□□□ -0.48
P04436 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
P04436 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P04436 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 AC019294.4-201ENST00000561777 2905 ntBASIC12.03□□□□□ -0.48
P04436 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC12.03□□□□□ -0.48
P04436 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P04436 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
P04436 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC12.02□□□□□ -0.48
P04436 AC010970.1-201ENST00000445125 1848 ntBASIC12.02□□□□□ -0.48
P04436 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.02□□□□□ -0.48
P04436 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.02□□□□□ -0.48
P04436 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
P04436 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P04436 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC12.02□□□□□ -0.49
P04436 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.02□□□□□ -0.49
P04436 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
P04436 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.02□□□□□ -0.49
P04436 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04436 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P04436 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms