Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 AP000553.2-201ENST00000609038 441 ntBASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 AF254983.2-201ENST00000612331 135 ntBASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 AP001505.2-201ENST00000616815 443 ntBASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 AC133919.3-201ENST00000621407 1804 ntBASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TRAF6Q9Y4K3 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AC092115.1-201ENST00000566277 1402 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ABCD1P4-201ENST00000399687 604 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 GUSBP10-201ENST00000417412 665 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 VTI1BP1-201ENST00000486325 700 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ORAOV1P1-201ENST00000503108 395 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AL132642.2-201ENST00000623423 1998 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AL357140.3-201ENST00000639753 1983 ntBASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAF6Q9Y4K3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AC009108.4-201ENST00000623284 2451 ntBASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAF6Q9Y4K3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms