Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ALX3O95076 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.83□□□□□ -0.52
ALX3O95076 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC11.83□□□□□ -0.52
ALX3O95076 AL162615.1-201ENST00000429893 1653 ntBASIC11.83□□□□□ -0.52
ALX3O95076 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 AC093525.7-201ENST00000569852 3626 ntBASIC11.83□□□□□ -0.52
ALX3O95076 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC11.83□□□□□ -0.52
ALX3O95076 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 PCDHGB8P-202ENST00000507007 2873 ntBASIC11.83□□□□□ -0.52
ALX3O95076 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 AL845472.1-202ENST00000624675 4080 ntBASIC11.83□□□□□ -0.52
ALX3O95076 FAM90A17P-201ENST00000533716 1957 ntBASIC11.83□□□□□ -0.52
ALX3O95076 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
ALX3O95076 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC11.83□□□□□ -0.52
ALX3O95076 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ALX3O95076 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC11.83□□□□□ -0.52
ALX3O95076 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALX3O95076 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC11.82□□□□□ -0.52
ALX3O95076 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 AL391294.1-201ENST00000641352 4068 ntBASIC11.82□□□□□ -0.52
ALX3O95076 AOC1-207ENST00000493429 3135 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 AP002008.2-201ENST00000635926 4870 ntBASIC11.82□□□□□ -0.52
ALX3O95076 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 MBP-201ENST00000354542 575 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.82□□□□□ -0.52
ALX3O95076 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ALX3O95076 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 HNRNPA1P41-201ENST00000397777 928 ntBASIC11.82□□□□□ -0.52
ALX3O95076 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.82□□□□□ -0.52
ALX3O95076 MIR1307-201ENST00000408840 149 ntBASIC11.82□□□□□ -0.52
ALX3O95076 AL008707.1-201ENST00000422498 534 ntBASIC11.82□□□□□ -0.52
ALX3O95076 AC098934.1-203ENST00000442868 1262 ntBASIC11.82□□□□□ -0.52
ALX3O95076 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC11.82□□□□□ -0.52
ALX3O95076 AC044849.1-201ENST00000519737 1188 ntBASIC11.82□□□□□ -0.52
ALX3O95076 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC11.82□□□□□ -0.52
ALX3O95076 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.82□□□□□ -0.52
ALX3O95076 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC11.82□□□□□ -0.52
ALX3O95076 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.82□□□□□ -0.52
ALX3O95076 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
ALX3O95076 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC11.82□□□□□ -0.52
ALX3O95076 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ALX3O95076 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.82□□□□□ -0.52
ALX3O95076 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
ALX3O95076 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALX3O95076 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms