Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHGA11Q9Y5H2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHGA11Q9Y5H2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHGA11Q9Y5H2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.33■■□□□ 1
PCDHGA11Q9Y5H2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHGA11Q9Y5H2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 MIR3621-201ENST00000580529 85 ntBASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
PCDHGA11Q9Y5H2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 AC241377.3-202ENST00000626088 1088 ntBASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 AC241585.3-202ENST00000628937 1088 ntBASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 AC245100.8-202ENST00000629247 1058 ntBASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 GUSBP5-202ENST00000510805 1989 ntBASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHGA11Q9Y5H2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGA11Q9Y5H2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGA11Q9Y5H2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA11Q9Y5H2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA11Q9Y5H2 AC137767.1-201ENST00000602918 1920 ntBASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms