Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 AC079630.1-202ENST00000618127 1840 ntBASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 AC131281.2-201ENST00000520478 145 ntBASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB3Q9Y5G1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHGB3Q9Y5G1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 AC019069.1-201ENST00000610008 1333 ntBASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGB3Q9Y5G1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB3Q9Y5G1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHGB3Q9Y5G1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.83■□□□□ 0.92
PCDHGB3Q9Y5G1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB3Q9Y5G1 AC242852.2-201ENST00000615738 1807 ntBASIC20.83■□□□□ 0.92
PCDHGB3Q9Y5G1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGB3Q9Y5G1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 AC144652.1-201ENST00000609974 1624 ntBASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGB3Q9Y5G1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 FP325331.1-202ENST00000623531 1380 ntBASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGB3Q9Y5G1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGB3Q9Y5G1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 AL353803.4-201ENST00000565882 1934 ntBASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGB3Q9Y5G1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms