Protein–RNA interactions for Protein: Q9Y4L5

RNF115, E3 ubiquitin-protein ligase RNF115, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF115Q9Y4L5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF115Q9Y4L5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 AL358852.1-201ENST00000623174 1268 ntBASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF115Q9Y4L5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 AC010525.1-201ENST00000585559 441 ntBASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF115Q9Y4L5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 MIR572-201ENST00000384983 95 ntBASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 YBX1P1-201ENST00000445822 960 ntBASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF115Q9Y4L5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF115Q9Y4L5 DUSP8P5-201ENST00000422884 1815 ntBASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 AC034268.1-201ENST00000441047 882 ntBASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 AL354811.1-201ENST00000610286 706 ntBASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF115Q9Y4L5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 AC012414.1-201ENST00000556676 535 ntBASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF115Q9Y4L5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF115Q9Y4L5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF115Q9Y4L5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
RNF115Q9Y4L5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF115Q9Y4L5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF115Q9Y4L5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms