Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.72■□□□□ 0.75
EXOSC1Q9Y3B2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 AC019171.1-201ENST00000601251 1056 ntBASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 FAM99A-202ENST00000538190 1989 ntBASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
EXOSC1Q9Y3B2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 AC010542.4-201ENST00000563151 1910 ntBASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EXOSC1Q9Y3B2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 AF131216.4-201ENST00000638924 1588 ntBASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EXOSC1Q9Y3B2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EXOSC1Q9Y3B2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EXOSC1Q9Y3B2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 AC120024.1-201ENST00000562672 995 ntBASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.66■□□□□ 0.74
EXOSC1Q9Y3B2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EXOSC1Q9Y3B2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms