Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LRCH1Q9Y2L9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH1Q9Y2L9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH1Q9Y2L9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 AC126177.7-201ENST00000547904 679 ntBASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 AC022413.1-201ENST00000624602 984 ntBASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH1Q9Y2L9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRCH1Q9Y2L9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRCH1Q9Y2L9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRCH1Q9Y2L9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 AF106564.1-201ENST00000607058 2553 ntBASIC20.89■□□□□ 0.93
LRCH1Q9Y2L9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH1Q9Y2L9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.88■□□□□ 0.93
LRCH1Q9Y2L9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH1Q9Y2L9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH1Q9Y2L9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.88■□□□□ 0.93
LRCH1Q9Y2L9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH1Q9Y2L9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.87■□□□□ 0.93
LRCH1Q9Y2L9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 RNF126P1-201ENST00000567452 1320 ntBASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRCH1Q9Y2L9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms