Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 BX005040.4-201ENST00000637145 1518 ntBASIC34.45■■■■□ 3.11
CDK11AQ9UQ88 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CDK11AQ9UQ88 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
CDK11AQ9UQ88 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
CDK11AQ9UQ88 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC34.45■■■■□ 3.11
CDK11AQ9UQ88 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.1
CDK11AQ9UQ88 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC34.45■■■■□ 3.1
CDK11AQ9UQ88 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC34.45■■■■□ 3.1
CDK11AQ9UQ88 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CDK11AQ9UQ88 HSCB-202ENST00000398941 955 ntTSL 2 BASIC34.44■■■■□ 3.1
CDK11AQ9UQ88 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
CDK11AQ9UQ88 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC34.44■■■■□ 3.1
CDK11AQ9UQ88 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
CDK11AQ9UQ88 AP004607.4-201ENST00000530158 1459 ntBASIC34.44■■■■□ 3.1
CDK11AQ9UQ88 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 COX20-201ENST00000366528 568 ntTSL 2 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 TK2-208ENST00000545043 1120 ntTSL 2 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC34.43■■■■□ 3.1
CDK11AQ9UQ88 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 STX7-201ENST00000367937 1090 ntTSL 5 BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
CDK11AQ9UQ88 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDK11AQ9UQ88 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC34.41■■■■□ 3.1
CDK11AQ9UQ88 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC34.41■■■■□ 3.1
CDK11AQ9UQ88 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDK11AQ9UQ88 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDK11AQ9UQ88 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
CDK11AQ9UQ88 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 CDCA4P2-201ENST00000441182 718 ntBASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 DBI-210ENST00000542275 757 ntTSL 5 BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
CDK11AQ9UQ88 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 AC073111.5-205ENST00000641717 521 ntBASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC34.39■■■■□ 3.1
CDK11AQ9UQ88 AC004854.2-201ENST00000608450 1441 ntBASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
CDK11AQ9UQ88 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 CREM-210ENST00000374721 2020 ntTSL 5 BASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 EI24-211ENST00000534546 1544 ntTSL 2 BASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 AC004687.1-201ENST00000579003 1625 ntBASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
CDK11AQ9UQ88 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 AC087239.1-201ENST00000622671 572 ntBASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
CDK11AQ9UQ88 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
CDK11AQ9UQ88 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC34.35■■■■□ 3.09
CDK11AQ9UQ88 AC079630.1-202ENST00000618127 1840 ntBASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 KRT19P1-201ENST00000405746 1186 ntBASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 AC010141.3-201ENST00000456659 717 ntBASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC34.34■■■■□ 3.09
CDK11AQ9UQ88 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
CDK11AQ9UQ88 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms