Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 C1orf229-201ENST00000623686 2258 ntBASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHA4Q9UN74 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 MIR4767-201ENST00000582827 78 ntBASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHA4Q9UN74 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 OR2I1P-207ENST00000453522 948 ntBASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 PBX2P1-201ENST00000493219 1291 ntBASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 AC106739.1-201ENST00000617035 715 ntBASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHA4Q9UN74 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
PCDHA4Q9UN74 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 AL139246.5-201ENST00000606645 996 ntBASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA4Q9UN74 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA4Q9UN74 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 AC010525.1-201ENST00000585559 441 ntBASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHA4Q9UN74 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA4Q9UN74 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA4Q9UN74 LINC01960-201ENST00000563759 1884 ntBASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 SLC47A1P1-202ENST00000449666 945 ntBASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms