Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 AC022517.1-201ENST00000592429 346 ntBASIC25.31■■□□□ 1.64
RNF146Q9NTX7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.31■■□□□ 1.64
RNF146Q9NTX7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 IKBKGP1-201ENST00000612193 1073 ntBASIC25.3■■□□□ 1.64
RNF146Q9NTX7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
RNF146Q9NTX7 LINC02228-203ENST00000641970 1355 ntBASIC25.3■■□□□ 1.64
RNF146Q9NTX7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 KRT18P14-201ENST00000534205 1250 ntBASIC25.29■■□□□ 1.64
RNF146Q9NTX7 TERF1P2-201ENST00000583350 1212 ntBASIC25.29■■□□□ 1.64
RNF146Q9NTX7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RNF146Q9NTX7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF146Q9NTX7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF146Q9NTX7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF146Q9NTX7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
RNF146Q9NTX7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF146Q9NTX7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF146Q9NTX7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RNF146Q9NTX7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 AC068587.7-201ENST00000641602 218 ntBASIC25.24■■□□□ 1.63
RNF146Q9NTX7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF146Q9NTX7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 NTF6G-201ENST00000591094 616 ntBASIC25.23■■□□□ 1.63
RNF146Q9NTX7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF146Q9NTX7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.22■■□□□ 1.63
RNF146Q9NTX7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RNF146Q9NTX7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF146Q9NTX7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.22■■□□□ 1.63
RNF146Q9NTX7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RNF146Q9NTX7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms