Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 MIR4466-201ENST00000606121 54 ntBASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDH18Q9HCL0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDH18Q9HCL0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 AC127496.7-201ENST00000625110 1798 ntBASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 SRD5A1P1-201ENST00000442297 786 ntBASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDH18Q9HCL0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 AC131281.2-201ENST00000520478 145 ntBASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 pRNA.6-201ENST00000610482 90 ntBASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 pRNA.5-201ENST00000612139 90 ntBASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 pRNA.11-201ENST00000618423 90 ntBASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 pRNA.13-201ENST00000619112 90 ntBASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PCDH18Q9HCL0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PCDH18Q9HCL0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.83■■□□□ 1.25
PCDH18Q9HCL0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH18Q9HCL0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 LINC01960-201ENST00000563759 1884 ntBASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 AC079834.2-201ENST00000609776 1949 ntBASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH18Q9HCL0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 AC133637.1-201ENST00000624115 1537 ntBASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDH18Q9HCL0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 EP400NL-214ENST00000641289 2402 ntBASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 ECEL1P1-201ENST00000373592 1742 ntBASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 MIR3181-201ENST00000578512 73 ntBASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH18Q9HCL0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.79■■□□□ 1.24
PCDH18Q9HCL0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms