Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 IKBKGP1-201ENST00000612193 1073 ntBASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.67■■□□□ 1.06
POLR1BQ9H9Y6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
POLR1BQ9H9Y6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1BQ9H9Y6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.65■■□□□ 1.06
POLR1BQ9H9Y6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1BQ9H9Y6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1BQ9H9Y6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1BQ9H9Y6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POLR1BQ9H9Y6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
POLR1BQ9H9Y6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 KRT18P5-201ENST00000436075 1291 ntBASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
POLR1BQ9H9Y6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.63■■□□□ 1.05
POLR1BQ9H9Y6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 SLC47A1P1-202ENST00000449666 945 ntBASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
POLR1BQ9H9Y6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 MIR6089-201ENST00000616698 64 ntBASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR1BQ9H9Y6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 AL031602.1-201ENST00000633169 911 ntBASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR1BQ9H9Y6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 TSPY26P-201ENST00000476365 1326 ntBASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 AC004812.2-201ENST00000611079 2094 ntBASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 ABCB10P4-201ENST00000566803 2184 ntBASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 pRNA.6-201ENST00000610482 90 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms