Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ATXN3LQ9H3M9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATXN3LQ9H3M9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATXN3LQ9H3M9 AP005435.1-201ENST00000529293 1178 ntBASIC23.18■■□□□ 1.3
ATXN3LQ9H3M9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATXN3LQ9H3M9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ATXN3LQ9H3M9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ATXN3LQ9H3M9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 AC123595.1-201ENST00000440769 1046 ntBASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
ATXN3LQ9H3M9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L2-201ENST00000561772 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L6-201ENST00000626483 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L1-201ENST00000627662 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L8-201ENST00000629013 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L3-201ENST00000630187 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L7-201ENST00000630678 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 DUX4L5-201ENST00000630834 1275 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 AC079630.1-202ENST00000618127 1840 ntBASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ATXN3LQ9H3M9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
ATXN3LQ9H3M9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.14■■□□□ 1.3
ATXN3LQ9H3M9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
ATXN3LQ9H3M9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.14■■□□□ 1.3
ATXN3LQ9H3M9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 KRT18P5-201ENST00000436075 1291 ntBASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
ATXN3LQ9H3M9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.13■■□□□ 1.29
ATXN3LQ9H3M9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.12■■□□□ 1.29
ATXN3LQ9H3M9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATXN3LQ9H3M9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms