Protein–RNA interactions for Protein: Q9H159

CDH19, Cadherin-19, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19Q9H159 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.28■■□□□ 1.16
CDH19Q9H159 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CDH19Q9H159 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH19Q9H159 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.28■■□□□ 1.16
CDH19Q9H159 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.28■■□□□ 1.16
CDH19Q9H159 AL138724.1-201ENST00000606771 1088 ntBASIC22.28■■□□□ 1.16
CDH19Q9H159 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CDH19Q9H159 AC009086.3-201ENST00000623486 1008 ntBASIC22.28■■□□□ 1.16
CDH19Q9H159 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH19Q9H159 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH19Q9H159 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.28■■□□□ 1.16
CDH19Q9H159 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDH19Q9H159 LINC00565-201ENST00000562710 2331 ntBASIC22.28■■□□□ 1.16
CDH19Q9H159 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.27■■□□□ 1.16
CDH19Q9H159 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDH19Q9H159 AC079630.1-202ENST00000618127 1840 ntBASIC22.27■■□□□ 1.15
CDH19Q9H159 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.26■■□□□ 1.15
CDH19Q9H159 UNC93B3-201ENST00000308076 687 ntBASIC22.26■■□□□ 1.15
CDH19Q9H159 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.26■■□□□ 1.15
CDH19Q9H159 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH19Q9H159 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH19Q9H159 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDH19Q9H159 SYT6-210ENST00000641643 1587 ntBASIC22.25■■□□□ 1.15
CDH19Q9H159 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH19Q9H159 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH19Q9H159 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CDH19Q9H159 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.25■■□□□ 1.15
CDH19Q9H159 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.25■■□□□ 1.15
CDH19Q9H159 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 AC133561.4-201ENST00000566112 224 ntBASIC22.25■■□□□ 1.15
CDH19Q9H159 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.25■■□□□ 1.15
CDH19Q9H159 AC106739.1-201ENST00000617035 715 ntBASIC22.25■■□□□ 1.15
CDH19Q9H159 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDH19Q9H159 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDH19Q9H159 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDH19Q9H159 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH19Q9H159 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 PBX2P1-201ENST00000493219 1291 ntBASIC22.24■■□□□ 1.15
CDH19Q9H159 AL136162.1-201ENST00000607711 1078 ntBASIC22.24■■□□□ 1.15
CDH19Q9H159 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.24■■□□□ 1.15
CDH19Q9H159 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH19Q9H159 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.24■■□□□ 1.15
CDH19Q9H159 AC135279.3-201ENST00000610945 1311 ntBASIC22.24■■□□□ 1.15
CDH19Q9H159 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDH19Q9H159 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CDH19Q9H159 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDH19Q9H159 GUSBP5-202ENST00000510805 1989 ntBASIC22.23■■□□□ 1.15
CDH19Q9H159 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.23■■□□□ 1.15
CDH19Q9H159 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDH19Q9H159 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDH19Q9H159 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDH19Q9H159 LINC00526-201ENST00000581067 1875 ntBASIC22.23■■□□□ 1.15
CDH19Q9H159 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDH19Q9H159 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDH19Q9H159 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.22■■□□□ 1.15
CDH19Q9H159 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CDH19Q9H159 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH19Q9H159 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH19Q9H159 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH19Q9H159 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.22■■□□□ 1.15
CDH19Q9H159 AL499627.2-201ENST00000606283 725 ntBASIC22.22■■□□□ 1.15
CDH19Q9H159 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.22■■□□□ 1.15
CDH19Q9H159 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH19Q9H159 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH19Q9H159 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDH19Q9H159 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.22■■□□□ 1.15
CDH19Q9H159 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH19Q9H159 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CDH19Q9H159 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.21■■□□□ 1.15
CDH19Q9H159 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH19Q9H159 AC011298.3-201ENST00000615796 283 ntBASIC22.21■■□□□ 1.15
CDH19Q9H159 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.21■■□□□ 1.15
CDH19Q9H159 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDH19Q9H159 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms