Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.31■■□□□ 1.8
NBPF3Q9H094 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC26.31■■□□□ 1.8
NBPF3Q9H094 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.3■■□□□ 1.8
NBPF3Q9H094 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.3■■□□□ 1.8
NBPF3Q9H094 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NBPF3Q9H094 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.3■■□□□ 1.8
NBPF3Q9H094 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
NBPF3Q9H094 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NBPF3Q9H094 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
NBPF3Q9H094 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
NBPF3Q9H094 AC004687.1-201ENST00000579003 1625 ntBASIC26.29■■□□□ 1.8
NBPF3Q9H094 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.29■■□□□ 1.8
NBPF3Q9H094 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NBPF3Q9H094 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NBPF3Q9H094 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
NBPF3Q9H094 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
NBPF3Q9H094 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NBPF3Q9H094 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.28■■□□□ 1.8
NBPF3Q9H094 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NBPF3Q9H094 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.28■■□□□ 1.8
NBPF3Q9H094 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NBPF3Q9H094 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.28■■□□□ 1.8
NBPF3Q9H094 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NBPF3Q9H094 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.27■■□□□ 1.8
NBPF3Q9H094 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.27■■□□□ 1.8
NBPF3Q9H094 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.27■■□□□ 1.8
NBPF3Q9H094 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NBPF3Q9H094 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NBPF3Q9H094 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NBPF3Q9H094 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NBPF3Q9H094 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
NBPF3Q9H094 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NBPF3Q9H094 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.26■■□□□ 1.79
NBPF3Q9H094 AC010525.1-201ENST00000585559 441 ntBASIC26.26■■□□□ 1.79
NBPF3Q9H094 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
NBPF3Q9H094 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NBPF3Q9H094 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.26■■□□□ 1.79
NBPF3Q9H094 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.26■■□□□ 1.79
NBPF3Q9H094 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NBPF3Q9H094 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.25■■□□□ 1.79
NBPF3Q9H094 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NBPF3Q9H094 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NBPF3Q9H094 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
NBPF3Q9H094 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NBPF3Q9H094 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.25■■□□□ 1.79
NBPF3Q9H094 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NBPF3Q9H094 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.25■■□□□ 1.79
NBPF3Q9H094 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
NBPF3Q9H094 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.25■■□□□ 1.79
NBPF3Q9H094 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
NBPF3Q9H094 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NBPF3Q9H094 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
NBPF3Q9H094 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
NBPF3Q9H094 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
NBPF3Q9H094 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.24■■□□□ 1.79
NBPF3Q9H094 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
NBPF3Q9H094 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.23■■□□□ 1.79
NBPF3Q9H094 SLC47A1P1-202ENST00000449666 945 ntBASIC26.23■■□□□ 1.79
NBPF3Q9H094 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.23■■□□□ 1.79
NBPF3Q9H094 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NBPF3Q9H094 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NBPF3Q9H094 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
NBPF3Q9H094 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
NBPF3Q9H094 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NBPF3Q9H094 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NBPF3Q9H094 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
NBPF3Q9H094 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.22■■□□□ 1.79
NBPF3Q9H094 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NBPF3Q9H094 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NBPF3Q9H094 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
NBPF3Q9H094 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
NBPF3Q9H094 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
NBPF3Q9H094 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NBPF3Q9H094 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
NBPF3Q9H094 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NBPF3Q9H094 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.21■■□□□ 1.79
NBPF3Q9H094 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.21■■□□□ 1.79
NBPF3Q9H094 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NBPF3Q9H094 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
NBPF3Q9H094 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
NBPF3Q9H094 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.2■■□□□ 1.78
NBPF3Q9H094 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.2■■□□□ 1.78
NBPF3Q9H094 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NBPF3Q9H094 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.2■■□□□ 1.78
NBPF3Q9H094 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.2■■□□□ 1.78
NBPF3Q9H094 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
NBPF3Q9H094 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.19■■□□□ 1.78
NBPF3Q9H094 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NBPF3Q9H094 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
NBPF3Q9H094 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
NBPF3Q9H094 OR2I1P-207ENST00000453522 948 ntBASIC26.19■■□□□ 1.78
NBPF3Q9H094 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
NBPF3Q9H094 CA15P2-201ENST00000611168 834 ntBASIC26.19■■□□□ 1.78
NBPF3Q9H094 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms