Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM2Q9C040 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM2Q9C040 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM2Q9C040 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM2Q9C040 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM2Q9C040 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRIM2Q9C040 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM2Q9C040 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM2Q9C040 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM2Q9C040 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRIM2Q9C040 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM2Q9C040 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM2Q9C040 AC127496.7-201ENST00000625110 1798 ntBASIC20.24■□□□□ 0.83
TRIM2Q9C040 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM2Q9C040 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM2Q9C040 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM2Q9C040 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM2Q9C040 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM2Q9C040 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM2Q9C040 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
TRIM2Q9C040 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM2Q9C040 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM2Q9C040 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM2Q9C040 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 C17orf82-201ENST00000623772 1530 ntBASIC20.23■□□□□ 0.83
TRIM2Q9C040 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM2Q9C040 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM2Q9C040 ECEL1P1-201ENST00000373592 1742 ntBASIC20.23■□□□□ 0.83
TRIM2Q9C040 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM2Q9C040 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.23■□□□□ 0.83
TRIM2Q9C040 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM2Q9C040 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM2Q9C040 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRIM2Q9C040 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM2Q9C040 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM2Q9C040 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM2Q9C040 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
TRIM2Q9C040 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRIM2Q9C040 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM2Q9C040 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM2Q9C040 AC008406.3-201ENST00000620001 1374 ntBASIC20.21■□□□□ 0.83
TRIM2Q9C040 AC242852.2-201ENST00000615738 1807 ntBASIC20.21■□□□□ 0.83
TRIM2Q9C040 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM2Q9C040 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM2Q9C040 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRIM2Q9C040 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM2Q9C040 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRIM2Q9C040 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.2■□□□□ 0.82
TRIM2Q9C040 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM2Q9C040 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM2Q9C040 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM2Q9C040 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM2Q9C040 LINC00526-201ENST00000581067 1875 ntBASIC20.2■□□□□ 0.82
TRIM2Q9C040 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM2Q9C040 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM2Q9C040 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM2Q9C040 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM2Q9C040 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM2Q9C040 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
TRIM2Q9C040 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM2Q9C040 AL117332.1-201ENST00000622628 974 ntBASIC20.18■□□□□ 0.82
TRIM2Q9C040 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM2Q9C040 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM2Q9C040 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM2Q9C040 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM2Q9C040 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM2Q9C040 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms