Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF2Q99496 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNF2Q99496 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF2Q99496 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF2Q99496 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RNF2Q99496 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF2Q99496 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RNF2Q99496 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF2Q99496 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF2Q99496 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF2Q99496 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF2Q99496 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF2Q99496 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF2Q99496 AC131274.2-201ENST00000580697 1507 ntBASIC17.44■□□□□ 0.38
RNF2Q99496 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RNF2Q99496 AC137630.3-201ENST00000607245 391 ntBASIC17.44■□□□□ 0.38
RNF2Q99496 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RNF2Q99496 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.44■□□□□ 0.38
RNF2Q99496 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RNF2Q99496 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF2Q99496 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF2Q99496 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RNF2Q99496 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF2Q99496 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF2Q99496 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF2Q99496 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF2Q99496 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF2Q99496 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF2Q99496 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 AC092053.2-201ENST00000640557 1818 ntBASIC17.42■□□□□ 0.38
RNF2Q99496 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.42■□□□□ 0.38
RNF2Q99496 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF2Q99496 AL451085.2-201ENST00000605085 799 ntBASIC17.42■□□□□ 0.38
RNF2Q99496 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF2Q99496 RNF165-205ENST00000588679 2904 ntBASIC17.42■□□□□ 0.38
RNF2Q99496 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF2Q99496 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF2Q99496 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF2Q99496 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF2Q99496 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF2Q99496 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF2Q99496 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF2Q99496 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF2Q99496 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF2Q99496 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF2Q99496 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF2Q99496 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF2Q99496 BX664725.1-201ENST00000438252 379 ntBASIC17.41■□□□□ 0.38
RNF2Q99496 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RNF2Q99496 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF2Q99496 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RNF2Q99496 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF2Q99496 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF2Q99496 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF2Q99496 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
RNF2Q99496 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF2Q99496 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF2Q99496 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF2Q99496 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms