Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 AC087388.1-201ENST00000571370 1112 ntBASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
SYNE2Q8WXH0 AC006538.3-201ENST00000612495 578 ntBASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 AP000347.1-202ENST00000435868 847 ntBASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC9.21□□□□□ -0.94
SYNE2Q8WXH0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 CNN2P6-201ENST00000439038 900 ntBASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 KRT18P16-201ENST00000510337 1294 ntBASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 AC105233.4-201ENST00000642045 216 ntBASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SYNE2Q8WXH0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 APTR-203ENST00000430801 583 ntTSL 5 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 MIR4758-201ENST00000577688 71 ntBASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 CYP2T3P-201ENST00000601990 817 ntBASIC9.19□□□□□ -0.94
SYNE2Q8WXH0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 AP000593.1-201ENST00000393668 712 ntBASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 AC113347.1-201ENST00000413321 391 ntBASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC9.18□□□□□ -0.94
SYNE2Q8WXH0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 AL139393.2-201ENST00000608721 2025 ntBASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SYNE2Q8WXH0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms