Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD6Q8TD26 MKRN4P-201ENST00000444706 1521 ntBASIC20.39■□□□□ 0.86
CHD6Q8TD26 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD6Q8TD26 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.39■□□□□ 0.85
CHD6Q8TD26 RN7SL850P-201ENST00000579959 291 ntBASIC20.39■□□□□ 0.85
CHD6Q8TD26 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD6Q8TD26 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.39■□□□□ 0.85
CHD6Q8TD26 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHD6Q8TD26 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD6Q8TD26 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD6Q8TD26 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD6Q8TD26 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CHD6Q8TD26 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 AC133637.1-201ENST00000624115 1537 ntBASIC20.38■□□□□ 0.85
CHD6Q8TD26 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CHD6Q8TD26 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CHD6Q8TD26 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHD6Q8TD26 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD6Q8TD26 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD6Q8TD26 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CHD6Q8TD26 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.37■□□□□ 0.85
CHD6Q8TD26 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CHD6Q8TD26 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CHD6Q8TD26 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHD6Q8TD26 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.37■□□□□ 0.85
CHD6Q8TD26 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CHD6Q8TD26 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.36■□□□□ 0.85
CHD6Q8TD26 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHD6Q8TD26 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.36■□□□□ 0.85
CHD6Q8TD26 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHD6Q8TD26 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHD6Q8TD26 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD6Q8TD26 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 AC012306.2-201ENST00000609350 630 ntBASIC20.35■□□□□ 0.85
CHD6Q8TD26 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.35■□□□□ 0.85
CHD6Q8TD26 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD6Q8TD26 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHD6Q8TD26 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD6Q8TD26 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.34■□□□□ 0.85
CHD6Q8TD26 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD6Q8TD26 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CHD6Q8TD26 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CHD6Q8TD26 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHD6Q8TD26 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD6Q8TD26 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CHD6Q8TD26 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD6Q8TD26 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.34■□□□□ 0.85
CHD6Q8TD26 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHD6Q8TD26 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.33■□□□□ 0.85
CHD6Q8TD26 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHD6Q8TD26 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD6Q8TD26 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD6Q8TD26 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD6Q8TD26 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD6Q8TD26 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.33■□□□□ 0.85
CHD6Q8TD26 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD6Q8TD26 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD6Q8TD26 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CHD6Q8TD26 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD6Q8TD26 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.33■□□□□ 0.84
CHD6Q8TD26 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CHD6Q8TD26 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD6Q8TD26 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CHD6Q8TD26 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD6Q8TD26 OR2I1P-207ENST00000453522 948 ntBASIC20.33■□□□□ 0.84
CHD6Q8TD26 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHD6Q8TD26 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD6Q8TD26 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHD6Q8TD26 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD6Q8TD26 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD6Q8TD26 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.32■□□□□ 0.84
CHD6Q8TD26 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.32■□□□□ 0.84
CHD6Q8TD26 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.32■□□□□ 0.84
CHD6Q8TD26 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD6Q8TD26 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD6Q8TD26 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD6Q8TD26 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD6Q8TD26 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD6Q8TD26 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD6Q8TD26 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms