Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.08■□□□□ 0.81
CLDN22Q8N7P3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.08■□□□□ 0.8
CLDN22Q8N7P3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN22Q8N7P3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN22Q8N7P3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN22Q8N7P3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 C11orf96-202ENST00000528572 1834 ntBASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 BX664725.1-201ENST00000438252 379 ntBASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLDN22Q8N7P3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 FP325331.1-202ENST00000623531 1380 ntBASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN22Q8N7P3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN22Q8N7P3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 AC080038.3-201ENST00000623346 1952 ntBASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 LINC01529-204ENST00000636474 1715 ntBASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN22Q8N7P3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 AL451085.2-201ENST00000605085 799 ntBASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLDN22Q8N7P3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 MIR6722-201ENST00000617286 78 ntBASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN22Q8N7P3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN22Q8N7P3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN22Q8N7P3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN22Q8N7P3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLDN22Q8N7P3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.02■□□□□ 0.79
CLDN22Q8N7P3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 AL137060.1-201ENST00000618151 2648 ntBASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN22Q8N7P3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms