Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 AC142472.1-201ENST00000612013 1741 ntBASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM20Q8N5G0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 BCL2-203ENST00000589955 5011 ntBASIC13.79□□□□□ -0.2
SMIM20Q8N5G0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 AC139530.1-201ENST00000575312 1977 ntBASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 AC005082.1-201ENST00000413042 2259 ntBASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM20Q8N5G0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM20Q8N5G0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM20Q8N5G0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.77□□□□□ -0.2
SMIM20Q8N5G0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM20Q8N5G0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SMIM20Q8N5G0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SMIM20Q8N5G0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMIM20Q8N5G0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM20Q8N5G0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM20Q8N5G0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM20Q8N5G0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMIM20Q8N5G0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.75□□□□□ -0.21
SMIM20Q8N5G0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms