Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.5■■□□□ 1.35
TTC39CQ8N584 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.5■■□□□ 1.35
TTC39CQ8N584 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
TTC39CQ8N584 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.49■■□□□ 1.35
TTC39CQ8N584 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.49■■□□□ 1.35
TTC39CQ8N584 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TTC39CQ8N584 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.49■■□□□ 1.35
TTC39CQ8N584 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TTC39CQ8N584 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
TTC39CQ8N584 AL355001.2-201ENST00000620617 1191 ntBASIC23.48■■□□□ 1.35
TTC39CQ8N584 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
TTC39CQ8N584 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TTC39CQ8N584 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC39CQ8N584 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC39CQ8N584 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC39CQ8N584 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC39CQ8N584 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.47■■□□□ 1.35
TTC39CQ8N584 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.47■■□□□ 1.35
TTC39CQ8N584 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC39CQ8N584 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TTC39CQ8N584 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TTC39CQ8N584 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC39CQ8N584 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC39CQ8N584 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC39CQ8N584 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TTC39CQ8N584 ESRRAP2-201ENST00000418437 1549 ntBASIC23.46■■□□□ 1.35
TTC39CQ8N584 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
TTC39CQ8N584 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.46■■□□□ 1.35
TTC39CQ8N584 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.46■■□□□ 1.35
TTC39CQ8N584 AC233992.3-201ENST00000607491 485 ntBASIC23.46■■□□□ 1.35
TTC39CQ8N584 AL031602.1-201ENST00000633169 911 ntBASIC23.46■■□□□ 1.35
TTC39CQ8N584 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.46■■□□□ 1.35
TTC39CQ8N584 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.45■■□□□ 1.35
TTC39CQ8N584 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.45■■□□□ 1.35
TTC39CQ8N584 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.45■■□□□ 1.35
TTC39CQ8N584 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TTC39CQ8N584 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TTC39CQ8N584 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TTC39CQ8N584 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TTC39CQ8N584 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TTC39CQ8N584 AP005435.1-201ENST00000529293 1178 ntBASIC23.45■■□□□ 1.34
TTC39CQ8N584 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TTC39CQ8N584 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.34
TTC39CQ8N584 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.45■■□□□ 1.34
TTC39CQ8N584 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.44■■□□□ 1.34
TTC39CQ8N584 SLC47A1P1-202ENST00000449666 945 ntBASIC23.44■■□□□ 1.34
TTC39CQ8N584 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
TTC39CQ8N584 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TTC39CQ8N584 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.44■■□□□ 1.34
TTC39CQ8N584 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TTC39CQ8N584 AC087239.1-201ENST00000622671 572 ntBASIC23.44■■□□□ 1.34
TTC39CQ8N584 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC39CQ8N584 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TTC39CQ8N584 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC39CQ8N584 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TTC39CQ8N584 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
TTC39CQ8N584 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
TTC39CQ8N584 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 LINC01960-201ENST00000563759 1884 ntBASIC23.43■■□□□ 1.34
TTC39CQ8N584 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.43■■□□□ 1.34
TTC39CQ8N584 AC027682.1-201ENST00000562846 899 ntBASIC23.43■■□□□ 1.34
TTC39CQ8N584 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.43■■□□□ 1.34
TTC39CQ8N584 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TTC39CQ8N584 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.42■■□□□ 1.34
TTC39CQ8N584 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
TTC39CQ8N584 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC39CQ8N584 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
TTC39CQ8N584 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TTC39CQ8N584 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TTC39CQ8N584 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
TTC39CQ8N584 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TTC39CQ8N584 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TTC39CQ8N584 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms