Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.46■■□□□ 1.03
RAB42Q8N4Z0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.45■■□□□ 1.03
RAB42Q8N4Z0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 AC024257.2-201ENST00000549699 147 ntBASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.45■■□□□ 1.02
RAB42Q8N4Z0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 AC106739.1-201ENST00000617035 715 ntBASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAB42Q8N4Z0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB42Q8N4Z0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 AC110285.6-201ENST00000617652 491 ntBASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.42■■□□□ 1.02
RAB42Q8N4Z0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 OR2I1P-207ENST00000453522 948 ntBASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 MIR4767-201ENST00000582827 78 ntBASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB42Q8N4Z0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 EDA-201ENST00000338901 1233 ntBASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 AC133561.4-201ENST00000566112 224 ntBASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.4■■□□□ 1.02
RAB42Q8N4Z0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAB42Q8N4Z0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RAB42Q8N4Z0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RAB42Q8N4Z0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB42Q8N4Z0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB42Q8N4Z0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms