Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 KRT16P3-201ENST00000439127 1283 ntBASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 DUX4L4-201ENST00000566884 1269 ntBASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 MIR6724-1-201ENST00000616420 92 ntBASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 MIR6724-2-201ENST00000616483 92 ntBASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 MIR6724-4-201ENST00000617390 92 ntBASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 MIR6724-3-201ENST00000622482 92 ntBASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00346Q8IVM7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 LINC00565-201ENST00000562710 2331 ntBASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 AC127496.7-201ENST00000625110 1798 ntBASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00346Q8IVM7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 AC242852.2-201ENST00000615738 1807 ntBASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 C17orf82-201ENST00000623772 1530 ntBASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 AC009086.3-201ENST00000623486 1008 ntBASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00346Q8IVM7 AC087742.1-201ENST00000575880 1738 ntBASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.45■□□□□ 0.7
LINC00346Q8IVM7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 AC080038.3-201ENST00000623346 1952 ntBASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 AC004687.1-201ENST00000579003 1625 ntBASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.44■□□□□ 0.7
LINC00346Q8IVM7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00346Q8IVM7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00346Q8IVM7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms