Protein–RNA interactions for Protein: Q6PIY5

C1orf228, Uncharacterized protein C1orf228, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228Q6PIY5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
C1orf228Q6PIY5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
C1orf228Q6PIY5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
C1orf228Q6PIY5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 AC009086.3-201ENST00000623486 1008 ntBASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
C1orf228Q6PIY5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
C1orf228Q6PIY5 DUSP8P3-201ENST00000399571 1760 ntBASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
C1orf228Q6PIY5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
C1orf228Q6PIY5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 MIR3181-201ENST00000578512 73 ntBASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.27■■□□□ 1.32
C1orf228Q6PIY5 AC079630.1-202ENST00000618127 1840 ntBASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 AC034268.1-201ENST00000441047 882 ntBASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
C1orf228Q6PIY5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 AC012676.1-201ENST00000574705 1949 ntBASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
C1orf228Q6PIY5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.24■■□□□ 1.31
C1orf228Q6PIY5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
C1orf228Q6PIY5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms