Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM53Q6P2H8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM53Q6P2H8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20■□□□□ 0.79
TMEM53Q6P2H8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM53Q6P2H8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 MTDHP2-201ENST00000601468 714 ntBASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM53Q6P2H8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 TSPY9P-201ENST00000440215 945 ntBASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 TSPY11P-201ENST00000442607 1045 ntBASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TMEM53Q6P2H8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM53Q6P2H8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 MIR6722-201ENST00000617286 78 ntBASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM53Q6P2H8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM53Q6P2H8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms