Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 ZNRF2P2-203ENST00000454624 420 ntBASIC20.8■□□□□ 0.92
LPCAT4Q643R3 AC093536.1-201ENST00000569153 554 ntBASIC20.8■□□□□ 0.92
LPCAT4Q643R3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LPCAT4Q643R3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LPCAT4Q643R3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 AL353803.4-201ENST00000565882 1934 ntBASIC20.78■□□□□ 0.92
LPCAT4Q643R3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LPCAT4Q643R3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LPCAT4Q643R3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LPCAT4Q643R3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 AC060814.1-201ENST00000554326 538 ntBASIC20.76■□□□□ 0.91
LPCAT4Q643R3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LPCAT4Q643R3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 CR559946.2-201ENST00000623684 991 ntBASIC20.75■□□□□ 0.91
LPCAT4Q643R3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LPCAT4Q643R3 LINC01521-201ENST00000504184 1943 ntBASIC20.74■□□□□ 0.91
LPCAT4Q643R3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.74■□□□□ 0.91
LPCAT4Q643R3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 AL391422.3-201ENST00000603791 2761 ntBASIC20.73■□□□□ 0.91
LPCAT4Q643R3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.73■□□□□ 0.91
LPCAT4Q643R3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 AF106564.1-201ENST00000607058 2553 ntBASIC20.72■□□□□ 0.91
LPCAT4Q643R3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms