Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 AC097493.4-201ENST00000641197 219 ntBASIC12.04□□□□□ -0.48
RNF213Q63HN8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 KRT18P35-201ENST00000510488 1269 ntBASIC12.04□□□□□ -0.48
RNF213Q63HN8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 AC026396.1-201ENST00000419388 421 ntBASIC12.04□□□□□ -0.48
RNF213Q63HN8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 AC133552.2-202ENST00000575694 574 ntBASIC12.04□□□□□ -0.48
RNF213Q63HN8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF213Q63HN8 POU5F1P4-201ENST00000413175 1085 ntBASIC12.04□□□□□ -0.48
RNF213Q63HN8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF213Q63HN8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 AC026366.1-201ENST00000488803 879 ntBASIC12.03□□□□□ -0.48
RNF213Q63HN8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 AC133561.5-201ENST00000635547 218 ntBASIC12.03□□□□□ -0.48
RNF213Q63HN8 AC142472.1-201ENST00000612013 1741 ntBASIC12.03□□□□□ -0.48
RNF213Q63HN8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF213Q63HN8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF213Q63HN8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RNF213Q63HN8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF213Q63HN8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RNF213Q63HN8 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.02□□□□□ -0.48
RNF213Q63HN8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.02□□□□□ -0.48
RNF213Q63HN8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC12.02□□□□□ -0.48
RNF213Q63HN8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RNF213Q63HN8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.02□□□□□ -0.49
RNF213Q63HN8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RNF213Q63HN8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RNF213Q63HN8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RNF213Q63HN8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.01□□□□□ -0.49
RNF213Q63HN8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RNF213Q63HN8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC12□□□□□ -0.49
RNF213Q63HN8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12□□□□□ -0.49
RNF213Q63HN8 MIPEPP3-201ENST00000412105 444 ntBASIC12□□□□□ -0.49
RNF213Q63HN8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC12□□□□□ -0.49
RNF213Q63HN8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RNF213Q63HN8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12□□□□□ -0.49
RNF213Q63HN8 BX005040.4-201ENST00000637145 1518 ntBASIC12□□□□□ -0.49
RNF213Q63HN8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RNF213Q63HN8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RNF213Q63HN8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RNF213Q63HN8 MKRN4P-201ENST00000444706 1521 ntBASIC11.99□□□□□ -0.49
RNF213Q63HN8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RNF213Q63HN8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RNF213Q63HN8 TPM4P1-201ENST00000436100 807 ntBASIC11.99□□□□□ -0.49
RNF213Q63HN8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RNF213Q63HN8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC11.99□□□□□ -0.49
RNF213Q63HN8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RNF213Q63HN8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RNF213Q63HN8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC11.99□□□□□ -0.49
RNF213Q63HN8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RNF213Q63HN8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.99□□□□□ -0.49
RNF213Q63HN8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms